RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ZNF398Q8TD17 642 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 IQCGQ9H095 443 aaKnown RBP17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 LRRC40Q9H9A6 602 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 ABI2Q9NYB9 513 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 BFARQ9NZS9 450 aa17.72■□□□□ 0.43
TRAPPC11-204ENST00000505676 IL1BP01584 269 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 SRGAP2BP0DMP2 458 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 FGFR3P22607 806 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 NPY2RP49146 381 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 RABGGTBP53611 331 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 ACTN3Q08043 901 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 SH2D5Q6ZV89 423 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 NPWQ8N729 165 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 TCP10LQ8TDR4 215 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 DEPDC1BQ8WUY9 529 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 FATE1Q969F0 183 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 SPATA17Q96L03 361 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 TEKT5Q96M29 485 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 PLAC1Q9HBJ0 212 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 MLXIPLQ9NP71 852 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 PRKAG3Q9UGI9 489 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 DHRS4L1P0CG22 281 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 FOXN2P32314 431 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 CCDC15Q0P6D6 951 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 SLC1A5Q15758 541 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 SYCP2LQ5T4T6 812 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 STXBP5Q5T5C0 1151 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 NAPEPLDQ6IQ20 393 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 PRPF39Q86UA1 669 aaKnown RBP17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 NPAS4Q8IUM7 802 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 CASS4Q9NQ75 786 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 PRG3Q9Y2Y8 225 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 AAR2Q9Y312 384 aaKnown RBP17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 PLXNA3P51805 1871 aa17.71■□□□□ 0.43
TRAPPC11-204ENST00000505676 KCNU1A8MYU2 1149 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 TRIM49D1C9J1S8 452 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 COPEO14579 308 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 CACNG3O60359 315 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 B4GALT3O60512 393 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 EDF1O60869 148 aaKnown RBP17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 PAGE1O75459 146 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 KCTD11Q693B1 232 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 CASC4Q6P4E1 433 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 CCDC117Q8IWD4 279 aaPredicted RBP17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 RAB3IL1Q8TBN0 382 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 CASD1Q96PB1 797 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 NBNO60934 754 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 MGAT5Q09328 741 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 NIPAL4Q0D2K0 466 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 MTM1Q13496 603 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 FYB2Q5VWT5 728 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 ANKS3Q6ZW76 656 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 C10orf67Q8IYJ2 551 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 ATPAF2Q8N5M1 289 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 DPF3Q92784 378 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 CDK5RAP1Q96SZ6 601 aaKnown RBP17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 NEU3Q9UQ49 428 aa17.7■□□□□ 0.42
TRAPPC11-204ENST00000505676 A0A1W2PQH9 124 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 WDR27A2RRH5 827 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 KCNK1O00180 336 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 KLF11O14901 512 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 ANXA9O76027 345 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 ALDH3A1P30838 453 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 KPNA1P52294 538 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 RPL10AP62906 217 aaKnown RBP17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 GPR17Q13304 367 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 CRYMQ14894 314 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 ANO4Q32M45 955 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 CCDC33Q8N5R6 958 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 DBF4BQ8NFT6 615 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 LRRN4Q8WUT4 740 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 ARNTL2Q8WYA1 636 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 ZNF75CPQ92670 426 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 CASP10Q92851 521 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 SLC39A13Q96H72 371 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 IL22Q9GZX6 179 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 RETREG1Q9H6L5 497 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 PPARGC1AQ9UBK2 798 aaKnown RBP17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 DNAJB4Q9UDY4 337 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 PHTF1Q9UMS5 762 aa17.69■□□□□ 0.42
TRAPPC11-204ENST00000505676 USP1O94782 785 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 MGAT1P26572 445 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 SPDYAQ5MJ70 313 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 FAM171A1Q5VUB5 890 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 RWDD4Q6NW29 188 aaKnown RBP17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 CTU1Q7Z7A3 348 aaKnown RBP17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 MPP5Q8N3R9 675 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 RTL3Q8N8U3 475 aaKnown RBP17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 ATP6V0D2Q8N8Y2 350 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 SERAC1Q96JX3 654 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 FCRL2Q96LA5 508 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 TLR8Q9NR97 1041 aaKnown RBP17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 ARHGAP42A6NI28 874 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 F8W810 466 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 PYGBP11216 843 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 YWHAQP27348 245 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 ETV4P43268 484 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 MLLT6P55198 1093 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 AFMIDQ63HM1 303 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms