RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KDELR1P24390 212 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 GBP1P32455 592 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 CD70P32970 193 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 PTPN7P35236 360 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 EIF2DP41214 584 aaKnown RBP5.09□□□□□ -1.59
LMNB1-208ENST00000504788 KIR2DL1P43626 348 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-208ENST00000504788 PLK1P53350 603 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 STARD6P59095 220 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 AMPD2Q01433 879 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 SLC10A2Q12908 348 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-208ENST00000504788 MTA1Q13330 715 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 GAS6Q14393 721 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 SIX1Q15475 284 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-208ENST00000504788 PTPRNQ16849 979 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 TMEM196Q5HYL7 178 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 ACBD5Q5T8D3 534 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-208ENST00000504788 NCBP2-AS2Q69YL0 99 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 MFSD7Q6UXD7 560 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 TPGS1Q6ZTW0 290 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 DAAM2Q86T65 1068 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 CIR1Q86X95 450 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-208ENST00000504788 KATNAL2Q8IYT4 538 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 UMODL1-AS1Q8N2C9 162 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 ATP6V0D2Q8N8Y2 350 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 FIBINQ8TAL6 211 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 ATP2A3Q93084 1043 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 OLFM3Q96PB7 478 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 CSPG4P5Q96PW8 444 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 PSMB7Q99436 277 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 NCAPGQ9BPX3 1015 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 ZNF670Q9BS34 389 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 NACA2Q9H009 215 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.09□□□□□ -1.59
LMNB1-208ENST00000504788 PLK2Q9NYY3 685 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 RCOR3Q9P2K3 495 aaPredicted RBP5.09□□□□□ -1.59
LMNB1-208ENST00000504788 WNT16Q9UBV4 365 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 SH3BP1Q9Y3L3 701 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 STARD13Q9Y3M8 1113 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 CACNA1IQ9P0X4 2223 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 FANCMQ8IYD8 2048 aa5.09□□□□□ -1.59
LMNB1-208ENST00000504788 hCG_1818297A0A087WSY0 165 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 A0A1B0GVM2 712 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 TCRBV7S2A1N4TA0A589 114 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 TCAF2A6NFQ2 919 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 SPECC1L-ADORA2AF8WAN1 911 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 PI4K2BG5E9Z4 385 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 PRPSAP2O60256 369 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 TSPAN3O60637 253 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 LUC7L3O95232 432 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 IPO7O95373 1038 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 FTCDO95954 541 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 APOEP02649 317 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 CHRNB1P11230 501 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 ADH5P11766 374 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 ERCC2P18074 760 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 MZF1P28698 734 aaPredicted RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 HTR7P34969 479 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 NOP2P46087 812 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 SLC11A2P49281 568 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 ZXDAP98168 799 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 LMAN2Q12907 356 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 PAFAH1B3Q15102 231 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 GEN1Q17RS7 908 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 ITPRIPL2Q3MIP1 535 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 FUT11Q495W5 492 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 MPPE1Q53F39 396 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 CWF19L1Q69YN2 538 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 FSTL4Q6MZW2 842 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 SCYL2Q6P3W7 929 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 RFX8Q6ZV50 586 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 CHST9Q7L1S5 443 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 KIAA1328Q86T90 577 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 RALGPS2Q86X27 583 aaPredicted RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 RHOT1Q8IXI2 618 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 LGI2Q8N0V4 545 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 RTL3Q8N8U3 475 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 TRIM58Q8NG06 486 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 EXD1Q8NHP7 514 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 ANP32BQ92688 251 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 EDAQ92838 391 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 TMA16Q96EY4 203 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 MRGPRX3Q96LB0 322 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 NSMCE3Q96MG7 304 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 RNF157Q96PX1 679 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 ACE2Q9BYF1 805 aaPredicted RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 TSGA10Q9BZW7 698 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 SIK2Q9H0K1 926 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 DHX35Q9H5Z1 703 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 RETREG1Q9H6L5 497 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 BRD9Q9H8M2 597 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 PDFQ9HBH1 243 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 LUC7LQ9NQ29 371 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 KLHL11Q9NVR0 708 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 TRMT1Q9NXH9 659 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 LSM7Q9UK45 103 aaKnown RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 MTF2Q9Y483 593 aaPredicted RBP5.09□□□□□ -1.6
LMNB1-208ENST00000504788 PLXND1Q9Y4D7 1925 aa5.09□□□□□ -1.6
LMNB1-208ENST00000504788 CCDC66A2RUB6 948 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 TMEM110-MUSTN1A8MSY1 372 aa5.08□□□□□ -1.6
LMNB1-208ENST00000504788 C10orf142B7Z368 130 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms