RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 WDR41Q9HAD4 459 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 VPS51Q9UID3 782 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 AP4E1Q9UPM8 1137 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TMA7Q9Y2S6 64 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TRIM17Q9Y577 477 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TNRC6CQ9HCJ0 1690 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 KCNU1A8MYU2 1149 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TK2O00142 265 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PHGDHO43175 533 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TPD52L2O43399 206 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ICAM1P05362 532 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 CA8P35219 290 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 HALP42357 657 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ZNF460Q14592 562 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 LSM12Q3MHD2 195 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 LRRC8EQ6NSJ5 796 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TMEM26Q6ZUK4 368 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 C12orf56Q8IXR9 622 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 C12orf29Q8N999 325 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PDCD6IPQ8WUM4 868 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 SLC7A3Q8WY07 619 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 JADE3Q92613 823 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ATP6V0A1Q93050 837 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 C12orf43Q96C57 262 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TWNKQ96RR1 684 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 CCDC167Q9P0B6 97 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TRPC5Q9UL62 973 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 C10orf71Q711Q0 1435 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 A6NL46 340 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 FBP2O00757 339 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TOR1BO14657 336 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 SLC26A4O43511 780 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 MAN1A2O60476 641 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ATE1O95260 518 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 GSRP00390 522 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 SERPINE1P05121 402 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 NCAM1P13591 858 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ZNF182P17025 639 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 CRHR1P34998 444 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PLK1P53350 603 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 CTBSQ01459 385 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 SFSWAPQ12872 951 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 CYP2A13Q16696 494 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ZNF699Q32M78 642 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 OLFML1Q6UWY5 402 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 CCDC60Q8IWA6 550 aaPredicted RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 SCUBE3Q8IX30 993 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 UBR7Q8N806 425 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PSD4Q8NDX1 1056 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 FAM151AQ8WW52 585 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ZFRQ96KR1 1074 aaKnown RBP7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PDCD2LQ9BRP1 358 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 B3GNT5Q9BYG0 378 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 C1orf21Q9H246 121 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PPCSQ9HAB8 311 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 TMPRSS4Q9NRS4 437 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 DNAJB4Q9UDY4 337 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 EGFL7Q9UHF1 273 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 ITGA11Q9UKX5 1188 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 COQ6Q9Y2Z9 468 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 PPME1Q9Y570 386 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 DGKBQ9Y6T7 804 aa7.8□□□□□ -1.16
NEDD9-208ENST00000504387 RNF103-CHMP3A0A140T963 221 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 ZBBXA8MT70 800 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 KLF11O14901 512 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 B4GAT1O43505 415 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 EGFRP00533 1210 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 UGT1A1P22309 533 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 UGT1A4P22310 534 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 RCVRNP35243 200 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 UGT1A3P35503 534 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 UGT1A5P35504 534 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PTK2BQ14289 1009 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PRPSAP1Q14558 356 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 MGAT5BQ3V5L5 792 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 TTC33Q6PID6 262 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 ELMSAN1Q6PJG2 1045 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 ZBTB49Q6ZSB9 765 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 NANOGNBQ7Z5D8 188 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 GPR141Q7Z602 305 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 TP53INP2Q8IXH6 220 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 NIM1KQ8IY84 436 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PLD5Q8N7P1 536 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 RMND5BQ96G75 393 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 BTBD9Q96Q07 612 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 ACO2Q99798 780 aaKnown RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 GCOM2Q9BZD3 368 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 CYP4F12Q9HCS2 524 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 JPH1Q9HDC5 661 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 COPG2Q9UBF2 871 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 ST14Q9Y5Y6 855 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 KIF13BQ9NQT8 1826 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 KCNK1O00180 336 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 CASQ2O14958 399 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PAPSS1O43252 624 aaPredicted RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 ADAM23O75077 832 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 PIGNO95427 931 aa7.79□□□□□ -1.16
NEDD9-208ENST00000504387 TRUB2O95900 331 aaKnown RBP7.79□□□□□ -1.16
NEDD9-208ENST00000504387 FUCA1P04066 466 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms