RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TGIF2Q9GZN2 237 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TAF1DQ9H5J8 278 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 MCCC2Q9HCC0 563 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 EVA1BQ9NVM1 165 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ARHGAP28Q9P2N2 729 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 RNF112Q9ULX5 631 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ALG1L2C9J202 215 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 H0YAE9 185 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 NFIBO00712 420 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 CDK2AP1O14519 115 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ALDH1A2O94788 518 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PET100P0DJ07 73 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PSKH1P11801 424 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 GNA11P29992 359 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 STAT5AP42229 794 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 GSTM5P46439 218 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 CASP9P55211 416 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 HERVK_113P62684 666 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ERVK-9P63128 1117 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ERVK-24P63145 666 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 NOMO3P69849 1222 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 AMPD2Q01433 879 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 NOMO1Q15155 1222 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TSNQ15631 228 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SHROOM1Q2M3G4 852 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PAGE2BQ5JRK9 111 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PPM1LQ5SGD2 360 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TMEM132EQ6IEE7 984 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 KCTD20Q7Z5Y7 419 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 FAM83AQ86UY5 434 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 LIX1LQ8IVB5 337 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 KCTD6Q8NC69 237 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF398Q8TD17 642 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 LRFN5Q96NI6 719 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 WACQ9BTA9 647 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 CDK19Q9BWU1 502 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 AGXT2Q9BYV1 514 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 POLR3FQ9H1D9 316 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TRIM36Q9NQ86 728 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 NSFL1CQ9UNZ2 370 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PTPRKQ15262 1439 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 RIMS2Q9UQ26 1411 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 GPATCH8Q9UKJ3 1502 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 GSAPA4D1B5 854 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 FAM155AB1AL88 458 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PITPNM1O00562 1244 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TRIM38O00635 465 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 BAG3O95817 575 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PABPC1P11940 636 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 FGFR4P22455 802 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 NR4A1P22736 598 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 GJB2P29033 226 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PPM1AP35813 382 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ALDH5A1P51649 535 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 MAZP56270 477 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SCAND1P57086 179 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 CARTPTQ16568 116 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 GPAT3Q53EU6 434 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PAGE2Q7Z2X7 111 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 CCNJLQ8IV13 435 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SLC35F3Q8IY50 421 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ATG16L2Q8NAA4 619 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 OR5J2Q8NH18 312 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 VPS33AQ96AX1 596 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 RRNAD1Q96FB5 475 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 MAT2BQ9NZL9 334 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ARMCX3Q9UH62 379 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 KDM5CP41229 1560 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 RIMBP3CA6NJZ7 1639 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RIMBP3BA6NNM3 1639 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RIMBP3Q9UFD9 1639 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ISPDA4D126 451 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SUPT3HB4E1H0 165 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PRR23D1E9PI22 279 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 K7ERQ8 282 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ZBTB24O43167 697 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 WDR47O94967 919 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 AGTP01019 485 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PRR23D2P0DMB1 279 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GALNSP34059 522 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 MTHFSP49914 203 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 VSNL1P62760 191 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SAPCD1Q5SSQ6 148 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 FAM69AQ5T7M9 428 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 IQCHQ86VS3 1027 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 UNC5CLQ8IV45 518 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TMEM151BQ8IW70 566 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SLC38A6Q8IZM9 456 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 C1orf52Q8N6N3 182 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TRPV1Q8NER1 839 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 KCNN1Q92952 543 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 EXOSC8Q96B26 276 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 BSCL2Q96G97 398 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 FAM111AQ96PZ2 611 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CCNL2Q96S94 520 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 NELL2Q99435 816 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF184Q99676 751 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CITED2Q99967 270 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SEC22CQ9BRL7 303 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms