RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 NCANO14594 1321 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 ASTN2O75129 1339 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 TISP43B9A030 160 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 MRASO14807 208 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 SASH3O75995 380 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 GJB6O95452 261 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 RHBDL3P58872 404 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 ZNF662Q6ZS27 426 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 RIOX2Q8IUF8 465 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 FAM71AQ8IYT1 594 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 CENPTQ96BT3 561 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC4A9Q96Q91 983 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 KCNK4Q9NYG8 393 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 TUFMP49411 452 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 STARD3Q14849 445 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 LGI2Q8N0V4 545 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 TSEN2Q8NCE0 465 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 DNAJC19Q96DA6 116 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 PIH1D1Q9NWS0 290 aaKnown RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 UXTQ9UBK9 157 aaPredicted RBP16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 UBIAD1Q9Y5Z9 338 aa16.85■□□□□ 0.29
PCDHA1-203ENST00000504120 MEIS2O14770 477 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 FGF10O15520 208 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 SYNCRIPO60506 623 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 RECQL4O94761 1208 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 OR56A5P0C7T3 313 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 PTPRAP18433 802 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 PPP2R1BP30154 601 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 ULBP1Q9BZM6 244 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 IGSF6O95976 241 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 CES3Q6UWW8 571 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 IL22Q9GZX6 179 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 UBA2Q9UBT2 640 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 RABGEF1Q9UJ41 708 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 TSHRP16473 764 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 ME2P23368 584 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 GLRA2P23416 452 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 ADRA1DP25100 572 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 PIK3CGP48736 1102 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 ZNF143P52747 638 aaPredicted RBP16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 CELF3Q5SZQ8 465 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 ZNF438Q7Z4V0 828 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 LUZP2Q86TE4 346 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 MCOLN3Q8TDD5 553 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 KAT5Q92993 513 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 LENG9Q96B70 501 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 PANX3Q96QZ0 392 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC25A23Q9BV35 468 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 MYLK2Q9H1R3 596 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 CDHR5Q9HBB8 845 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 ACTL7BQ9Y614 415 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 CCDC154A6NI56 674 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 USP17L7P0C7H9 530 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 MMP13P45452 471 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 FSCN1Q16658 493 aaKnown RBP16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 FAM45BPQ6NSW5 357 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 METTL6Q8TCB7 284 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 TAS2R14Q9NYV8 317 aa16.84■□□□□ 0.29
PCDHA1-203ENST00000504120 A0A0A0MRY4 1105 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 C15orf38-AP3S2A0A0A6YYH1 394 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 RPS7P62081 194 aaKnown RBP16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 AMPD2Q01433 879 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 SNX30Q5VWJ9 437 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 ARPINQ7Z6K5 226 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 MILR1Q7Z6M3 343 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 PSTKQ8IV42 348 aaKnown RBP16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 TMEM161BQ8NDZ6 487 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 SENP8Q96LD8 212 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 SPATA13Q96N96 652 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 POLR1EQ9GZS1 481 aaKnown RBP16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 XPNPEP3Q9NQH7 507 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 RPS6KB2Q9UBS0 482 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 TSPAN3O60637 253 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 KATNA1O75449 491 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 ADRB2P07550 413 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 RFX3P48380 749 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 RXRGP48443 463 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 SLC39A12Q504Y0 691 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 FOXR2Q6PJQ5 311 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 TMEM26Q6ZUK4 368 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 CHMP1BQ7LBR1 199 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 CCDC103Q8IW40 242 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 GDPD5Q8WTR4 605 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 FIG4Q92562 907 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 MRPL48Q96GC5 212 aaKnown RBP16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 HSFY1Q96LI6 401 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 KLHL28Q9NXS3 571 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 STK39Q9UEW8 545 aa16.83■□□□□ 0.29
PCDHA1-203ENST00000504120 MAP2K7O14733 419 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 DLGAP3O95886 979 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 PTPN1P18031 435 aaKnown RBP16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 ADCYAP1R1P41586 468 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 KHDRBS2Q5VWX1 349 aaKnown RBP16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 CATSPERGQ6ZRH7 1159 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 SERAC1Q96JX3 654 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 POMKQ9H5K3 350 aa16.83■□□□□ 0.28
PCDHA1-203ENST00000504120 SERPINI2O75830 405 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms