RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 NFE2L3Q9Y4A8 694 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 FHOD1Q9Y613 1164 aa22.77■■□□□ 1.24
LSM6-203ENST00000503982 CACNA1EQ15878 2313 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 DAB1O75553 588 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 SPINK2P20155 84 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 SHC2P98077 582 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 PTPN20Q4JDL3 420 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 MIIPQ5JXC2 388 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 TTC39BQ5VTQ0 682 aaPredicted RBP22.76■■□□□ 1.23
LSM6-203ENST00000503982 APCDD1Q8J025 514 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 LMLNQ96KR4 655 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 OMDQ99983 421 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 PCED1AQ9H1Q7 454 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 DNAAF2Q9NVR5 837 aaKnown RBP22.76■■□□□ 1.23
LSM6-203ENST00000503982 TAB2Q9NYJ8 693 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 PCNX2A6NKB5 2137 aa22.76■■□□□ 1.23
LSM6-203ENST00000503982 EDDM13A0A1B0GTR0 161 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 TTC34A8MYJ7 566 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 M0QYT0 321 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 CER1O95813 267 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 MATKP42679 507 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 TEAD4Q15561 434 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 HNRNPA1L2Q32P51 320 aaKnown RBP22.75■■□□□ 1.23
LSM6-203ENST00000503982 OLFML1Q6UWY5 402 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 SND1Q7KZF4 910 aaKnown RBP eCLIP22.75■■□□□ 1.23
LSM6-203ENST00000503982 ADAT2Q7Z6V5 191 aaKnown RBP22.75■■□□□ 1.23
LSM6-203ENST00000503982 PIP4P1Q86T03 277 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 MMAAQ8IVH4 418 aaKnown RBP22.75■■□□□ 1.23
LSM6-203ENST00000503982 FAM71AQ8IYT1 594 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 CCAR2Q8N163 923 aaKnown RBP22.75■■□□□ 1.23
LSM6-203ENST00000503982 MRGPRX3Q96LB0 322 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 SIK2Q9H0K1 926 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 RSPH9Q9H1X1 276 aaPredicted RBP22.75■■□□□ 1.23
LSM6-203ENST00000503982 PABPC3Q9H361 631 aaKnown RBP22.75■■□□□ 1.23
LSM6-203ENST00000503982 GAREM1Q9H706 876 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 SGK2Q9HBY8 427 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 FBXL12Q9NXK8 326 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 VANGL2Q9ULK5 521 aa22.75■■□□□ 1.23
LSM6-203ENST00000503982 CHD8Q9HCK8 2581 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 SH3BP5O60239 455 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 RNASEH2AO75792 299 aaKnown RBP22.74■■□□□ 1.23
LSM6-203ENST00000503982 NOS2P35228 1153 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 GGCXP38435 758 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 PSMD8P48556 350 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 SULT1E1P49888 294 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 SLC12A1Q13621 1099 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 TCP11X2Q5H9J9 407 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 KLHDC7AQ5VTJ3 777 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 ERICH1Q86X53 443 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 MSANTD4Q8NCY6 345 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 SETD7Q8WTS6 366 aaKnown RBP22.74■■□□□ 1.23
LSM6-203ENST00000503982 MYO19Q96H55 970 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.74■■□□□ 1.23
LSM6-203ENST00000503982 SLCO3A1Q9UIG8 710 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 STAP1Q9ULZ2 295 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 SCML1Q9UN30 329 aa22.74■■□□□ 1.23
LSM6-203ENST00000503982 TMEM131Q92545 1883 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 TP53BP1Q12888 1972 aaPredicted RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 A0A1B0GVM2 712 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 A0A1B0GVT2 93 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 A0A1W2PP55 124 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 TARSL2A2RTX5 802 aaKnown RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 TCAF2A6NFQ2 919 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 UPK3BL1B0FP48 263 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 UPK3BL2E5RIL1 263 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 MID1O15344 667 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 CD59P13987 128 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 EEF1GP26641 437 aaKnown RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 CSNK1EP49674 416 aaKnown RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 STK19P49842 368 aaPredicted RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 AFF3P51826 1226 aaKnown RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 OXCT1P55809 520 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 CENPCQ03188 943 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 SLC14A1Q13336 389 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 ZNF177Q13360 481 aaPredicted RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 CST6Q15828 149 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 ACCSLQ4AC99 568 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 FAM102AQ5T9C2 384 aaPredicted RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 CAVIN1Q6NZI2 390 aaKnown RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 FBXL22Q6P050 247 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 IL27RAQ6UWB1 636 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 SLC26A9Q7LBE3 791 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 ZDHHC17Q8IUH5 632 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 KDM1BQ8NB78 822 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 CAMK1GQ96NX5 476 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 PPP1R9BQ96SB3 815 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 VPS16Q9H269 839 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 ANO10Q9NW15 660 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 RRN3Q9NYV6 651 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 SLC25A13Q9UJS0 675 aa22.73■■□□□ 1.23
LSM6-203ENST00000503982 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 MAP1BP46821 2468 aaKnown RBP22.73■■□□□ 1.23
LSM6-203ENST00000503982 GOLGA8SH3BPF8 625 aa22.72■■□□□ 1.23
LSM6-203ENST00000503982 TOP3BO95985 862 aaKnown RBP22.72■■□□□ 1.23
LSM6-203ENST00000503982 CYP11B1P15538 503 aa22.72■■□□□ 1.23
LSM6-203ENST00000503982 MZF1P28698 734 aaPredicted RBP22.72■■□□□ 1.23
LSM6-203ENST00000503982 DEUP1Q05D60 604 aa22.72■■□□□ 1.23
LSM6-203ENST00000503982 SULT2A1Q06520 285 aa22.72■■□□□ 1.23
LSM6-203ENST00000503982 KCNMA1Q12791 1236 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms