RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ZBTB17Q13105 803 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 TRIM60Q495X7 471 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 GKAP1Q5VSY0 366 aaPredicted RBP21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 C6orf89Q6UWU4 347 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 PIGWQ7Z7B1 504 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 DEFB128Q7Z7B8 93 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 SLC26A11Q86WA9 606 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 LRRC6Q86X45 466 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 GDAP1Q8TB36 358 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 GPR152Q8TDT2 470 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 CELF6Q96J87 481 aaKnown RBP21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 MAGEB18Q96M61 343 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 TSGA13Q96PP4 275 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 TRIM56Q9BRZ2 755 aaKnown RBP21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 CRISPLD2Q9H0B8 497 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 GBA3Q9H227 469 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 CATSPERBQ9H7T0 1116 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 SMYD2Q9NRG4 433 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 ZNF180Q9UJW8 692 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 HS3ST4Q9Y661 456 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 IKBKGQ9Y6K9 419 aa21.89■■□□□ 1.09
UBE2D3-216ENST00000503742 FAM159BA6NKW6 160 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 CXorf49A8MYA2 514 aaPredicted RBP21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 ZBTB24O43167 697 aaPredicted RBP21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 SUN1O94901 812 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 MLLT6P55198 1093 aaPredicted RBP21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 COG7P83436 770 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.88■■□□□ 1.094e-6■■■□□ 19.2
UBE2D3-216ENST00000503742 SRLQ86TD4 932 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 LZTR1Q8N653 840 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 C2orf15Q8WU43 125 aaKnown RBP21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 ARNTL2Q8WYA1 636 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 STAMBPL1Q96FJ0 436 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 COMMD8Q9NX08 183 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 MOCS1Q9NZB8 636 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 ATXN2Q99700 1313 aaKnown RBP21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 AP2A1O95782 977 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 VIMP08670 466 aaKnown RBP21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 RPA3P35244 121 aaPredicted RBP21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 MGAT5BQ3V5L5 792 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 C1orf53Q5VUE5 145 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 KCTD11Q693B1 232 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 C14orf80Q86SX3 495 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 TAX1BP1Q86VP1 789 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 FBXO32Q969P5 355 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 VWCEQ96DN2 955 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 TEKT5Q96M29 485 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 FAM169AQ9Y6X4 670 aa21.88■■□□□ 1.09
UBE2D3-216ENST00000503742 WDR27A2RRH5 827 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 TCP11X1B4DZS4 312 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 E9PAM4 449 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 FAM155BO75949 473 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 ALDH1A2O94788 518 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 SLC2A3P11169 496 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 PSEN1P49768 467 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 TBX4P57082 545 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 PIK3R6Q5UE93 754 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 TRMT10BQ6PF06 316 aaKnown RBP21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 PRSS55Q6UWB4 352 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 SH2D5Q6ZV89 423 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 MICALCLQ6ZW33 695 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 PPM1NQ8N819 430 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 ALKBH8Q96BT7 664 aaKnown RBP21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 TBX21Q9UL17 535 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 RRP15Q9Y3B9 282 aaKnown RBP21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 WASH4PA8MWX3 477 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 MOCS2O96007 188 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 CA4P22748 312 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 CCNCP24863 283 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 MGAT1P26572 445 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 TUBP50607 506 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 IL9RQ01113 521 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 TAF10Q12962 218 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 DUSP4Q13115 394 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 RASIP1Q5U651 963 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 AFMIDQ63HM1 303 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 ITPRIPL1Q6GPH6 555 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 CCNJLQ8IV13 435 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 RNF168Q8IYW5 571 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 ZNF683Q8IZ20 524 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 CACNA2D3Q8IZS8 1091 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 BANPQ8N9N5 519 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 OXNAD1Q96HP4 312 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 AGAP3Q96P47 875 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 SEPT5Q99719 369 aaPredicted RBP21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 CWH43Q9H720 699 aa21.87■■□□□ 1.09
UBE2D3-216ENST00000503742 ERI2A8K979 691 aaKnown RBP21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 SESN2P58004 480 aaPredicted RBP21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 SPARCL1Q14515 664 aa21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 SLC1A5Q15758 541 aa21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 TTC39BQ5VTQ0 682 aaPredicted RBP21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 CTAGE3PQ8IX95 158 aa21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 KLHDC8BQ8IXV7 354 aa21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 NAT9Q9BTE0 207 aa21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 NSRP1Q9H0G5 558 aaKnown RBP21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 TLR8Q9NR97 1041 aaKnown RBP21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 OLA1Q9NTK5 396 aaKnown RBP21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 COL4A6Q14031 1691 aa21.86■■□□□ 1.09
UBE2D3-216ENST00000503742 CACNG3O60359 315 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms