RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 TAF3Q5VWG9 929 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 SLC26A9Q7LBE3 791 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 CCAR2Q8N163 923 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 TMEM35BQ8NCS4 154 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 RPL10LQ96L21 214 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 RPRD1AQ96P16 312 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 PRMT1Q99873 361 aaKnown RBP20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 ZDHHC5Q9C0B5 715 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 RSPH9Q9H1X1 276 aaPredicted RBP20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 NCKAP1Q9Y2A7 1128 aa20.07■□□□□ 0.8
UBE2D3-215ENST00000503418 A0A1B0GVM2 712 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 SPAARA0A1B0GVQ0 90 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 TCAF2A6NFQ2 919 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 M0QYT0 321 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 CYP11B1P15538 503 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 EEF1GP26641 437 aaKnown RBP20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 NOS2P35228 1153 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 GGCXP38435 758 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 SIM1P81133 766 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 CENPCQ03188 943 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 CT47A1Q5JQC4 288 aaPredicted RBP20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 FBXL22Q6P050 247 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 ZDHHC17Q8IUH5 632 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 KDM1BQ8NB78 822 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 PABPC3Q9H361 631 aaKnown RBP20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 SLCO3A1Q9UIG8 710 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 VANGL2Q9ULK5 521 aa20.06■□□□□ 0.8
UBE2D3-215ENST00000503418 EDDM13A0A1B0GTR0 161 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 FAM47DPA6NHR8 397 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 MID1O15344 667 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 FSBPO95073 299 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 C7P10643 843 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 CD59P13987 128 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 UCHL3P15374 230 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 SPINK2P20155 84 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 MZF1P28698 734 aaPredicted RBP20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 MATKP42679 507 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 STK19P49842 368 aaPredicted RBP20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 SLC12A1Q13621 1099 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 AUHQ13825 339 aaKnown RBP20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 ST3GAL2Q16842 350 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 C9orf64Q5T6V5 341 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 CLEC17AQ6ZS10 378 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 MMAAQ8IVH4 418 aaKnown RBP20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 ZNF397Q8NF99 534 aaPredicted RBP20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 IGSF8Q969P0 613 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 SGK2Q9HBY8 427 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 FBXL12Q9NXK8 326 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 SCML1Q9UN30 329 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 HS3ST4Q9Y661 456 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 CHD8Q9HCK8 2581 aa20.05■□□□□ 0.8
UBE2D3-215ENST00000503418 MAP1BP46821 2468 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 ITIH6Q6UXX5 1313 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 A0A1W2PP55 124 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 TARSL2A2RTX5 802 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 GJB3O75712 270 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 TOP3BO95985 862 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 NNMTP40261 264 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 SULT1E1P49888 294 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 SLC14A1Q13336 389 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 ARID5BQ14865 1188 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 CST6Q15828 149 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 FAM102AQ5T9C2 384 aaPredicted RBP20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 ERICH1Q86X53 443 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 ENOX1Q8TC92 643 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 BIRC7Q96CA5 298 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 C18orf8Q96DM3 657 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 CAMK1GQ96NX5 476 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 NAA15Q9BXJ9 866 aaKnown RBP20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 SIK2Q9H0K1 926 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 VPS16Q9H269 839 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 GAREM1Q9H706 876 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 RRN3Q9NYV6 651 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 SERGEFQ9UGK8 458 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 STAP1Q9ULZ2 295 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 SLCO1B1Q9Y6L6 691 aa20.04■□□□□ 0.8
UBE2D3-215ENST00000503418 A0A1B0GVT2 93 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 F8VZ95 297 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 SH3BP5O60239 455 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 PAGE1O75459 146 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 RNASEH2AO75792 299 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 CER1O95813 267 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 TFE3P19532 575 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 CDH5P33151 784 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 PSMD8P48556 350 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 CSNK1EP49674 416 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 IRAK1P51617 712 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 AFF3P51826 1226 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 OXCT1P55809 520 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 FAM193AP78312 1265 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 SULT2A1Q06520 285 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 MTA1Q13330 715 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 C2CD6Q53TS8 623 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 OTUD1Q5VV17 481 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 CXorf57Q6NSI4 855 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 LRSAM1Q6UWE0 723 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 USP30Q70CQ3 517 aa20.03■□□□□ 0.8
UBE2D3-215ENST00000503418 SND1Q7KZF4 910 aaKnown RBP eCLIP20.03■□□□□ 0.83e-6■□□□□ 8.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms