RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ITGA8P53708 1063 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CDH4P55283 916 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 OXCT1P55809 520 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 SARNPP82979 210 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CDK16Q00536 496 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 AP1B1Q10567 949 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 PARP15Q460N3 678 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 TMCO4Q5TGY1 634 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 RAP1GAP2Q684P5 730 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 TXNDC8Q6A555 127 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 ITPRIPL1Q6GPH6 555 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 HIBCHQ6NVY1 386 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 ZNF783Q6ZMS7 281 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 ARHGEF18Q6ZSZ5 1173 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 HTR3DQ70Z44 454 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CHST9Q7L1S5 443 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 SETD3Q86TU7 594 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 NLRP14Q86W24 1093 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CCDC13Q8IYE1 715 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 ATPAF2Q8N5M1 289 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 ARL14EPQ8N8R7 260 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 FBXO25Q8TCJ0 367 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 NSMCE1Q8WV22 266 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 TIFAQ96CG3 184 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 SPATA13Q96N96 652 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 MAGEB5Q9BZ81 275 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 RNF38Q9H0F5 515 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 PRDM12Q9H4Q4 367 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 ZDHHC18Q9NUE0 388 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 GOLGA6AQ9NYA3 693 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 GRHL1Q9NZI5 618 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 LMCD1Q9NZU5 365 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 XPO7Q9UIA9 1087 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 VANGL2Q9ULK5 521 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 ARHGAP26Q9UNA1 814 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 SH3BP1Q9Y3L3 701 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 HCFC2Q9Y5Z7 792 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 CPQQ9Y646 472 aa8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 MTCL1Q9Y4B5 1905 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-202ENST00000503338 TMEM265A0A087WTH1 108 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 CCDC195A0A1B0GUA6 201 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 A0A1B0GVM2 712 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 A0A1W2PPC1 479 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 A0A1W2PRU2 124 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 E2F8A0AVK6 867 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 TCAF2A6NFQ2 919 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 ERI2A8K979 691 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 AP3B1O00203 1094 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 PSMD3O43242 534 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 RAMP2O60895 175 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 PPFIA2O75334 1257 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 MYBL2P10244 700 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 EPCAMP16422 314 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 ECHS1P30084 290 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 OR1E1P30953 314 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 RPL22P35268 128 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 HSPA9P38646 679 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 MAGEA6P43360 314 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 VPS41P49754 854 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 KCNQ1P51787 676 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 GDF10P55107 478 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 ARL4CP56559 192 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 BASP1P80723 227 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 CYP4F8P98187 520 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 CASP8Q14790 479 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 TRIP13Q15645 432 aaPredicted RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 PARP6Q2NL67 630 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM133BQ5BKY9 247 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 MPP7Q5T2T1 576 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 CFAP58Q5T655 872 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 GPR158Q5T848 1215 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 RNASEH2BQ5TBB1 312 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 ALS2CLQ60I27 953 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 AFMIDQ63HM1 303 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 NADSYN1Q6IA69 706 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 RHBDF2Q6PJF5 856 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 ZDHHC24Q6UX98 284 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 TMEM184AQ6ZMB5 413 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 Q6ZNB5 142 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 C14orf80Q86SX3 495 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 CROCCP2Q86T23 111 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 RELL1Q8IUW5 271 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 DENND1CQ8IV53 801 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 CCDC117Q8IWD4 279 aaPredicted RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 FAM217AQ8IXS0 508 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 HS6ST3Q8IZP7 471 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 CMTM8Q8IZV2 173 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 LGI2Q8N0V4 545 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 CPXM2Q8N436 756 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 ZCCHC9Q8N567 271 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 NPWQ8N729 165 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 MAB21L3Q8N8X9 362 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 ZNF557Q8N988 423 aaPredicted RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 EXOC4Q96A65 974 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 OTUB2Q96DC9 234 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 P2RY11Q96G91 374 aa8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 ZFRQ96KR1 1074 aaKnown RBP8.34□□□□□ -1.07
TOPBP1-202ENST00000503338 RUFY1Q96T51 708 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms