RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CD19P15391 556 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 CD38P28907 300 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 HNF1BP35680 557 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 NNMTP40261 264 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 CSKP41240 450 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 ARRB1P49407 418 aaPredicted RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 C21orf59P57076 290 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 ECT2LQ008S8 904 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 STIM1Q13586 685 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 CDH18Q13634 790 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 CST6Q15828 149 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 C5orf22Q49AR2 442 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC45A4Q5BKX6 768 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 DCAF17Q5H9S7 520 aaPredicted RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 FOXD4L5Q5VV16 416 aaPredicted RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 TCERG1LQ5VWI1 586 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 ANKRD40Q6AI12 368 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 NADSYN1Q6IA69 706 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 NEK5Q6P3R8 708 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 TMEM270Q6UE05 265 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 ENOSF1Q7L5Y1 443 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 TRIM69Q86WT6 500 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 MFSD2AQ8NA29 543 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 UBA3Q8TBC4 463 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 WFDC5Q8TCV5 224 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 CYB5D2Q8WUJ1 264 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 FOXD4L4Q8WXT5 416 aaPredicted RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 TFAP2BQ92481 460 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 EDEM1Q92611 657 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 PTPRN2Q92932 1015 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 PRICKLE1Q96MT3 831 aaPredicted RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 SPAG5Q96R06 1193 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 MED15Q96RN5 788 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 FAM129BQ96TA1 746 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 PRMT1Q99873 361 aaKnown RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 ZSWIM1Q9BR11 485 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 SRRTQ9BXP5 876 aaKnown RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC4A5Q9BY07 1137 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 GOLPH3LQ9H4A5 285 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 POPDC2Q9HBU9 364 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 FBXL12Q9NXK8 326 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 FTSJ1Q9UET6 329 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 RALYQ9UKM9 306 aaKnown RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 ERVW-1Q9UQF0 538 aa6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 DSPP15924 2871 aaKnown RBP6.32□□□□□ -1.4
LSM3P4-201ENST00000502948 CHD5Q8TDI0 1954 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 APC2O95996 2303 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 A0A1B0GVM2 712 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 TCAF2A6NFQ2 919 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 KCNU1A8MYU2 1149 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 RNF225M0QZC1 329 aaPredicted RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 MSI1O43347 362 aaKnown RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 MED7O43513 233 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 PLRG1O43660 514 aaKnown RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 LZTS3O60299 673 aaPredicted RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 SIN3BO75182 1162 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 FSBPO95073 299 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 APOEP02649 317 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 LCP1P13796 627 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 ACP1P24666 158 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 EPHA8P29322 1005 aaPredicted RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC8A1P32418 973 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 SGSHP51688 502 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 PMS1P54277 932 aaKnown RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 ADPRHP54922 357 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 NXPH1P58417 271 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 YWHAZP63104 245 aaKnown RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 CCDC15Q0P6D6 951 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 PNOCQ13519 176 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 KCNJ12Q14500 433 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 SHBQ15464 509 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 COL28A1Q2UY09 1125 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 DCAF6Q58WW2 860 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 PITRM1Q5JRX3 1037 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 KCNT1Q5JUK3 1230 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 C6orf118Q5T5N4 469 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 FAM46CQ5VWP2 391 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 NAPEPLDQ6IQ20 393 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 RFWD3Q6PCD5 774 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 KANSL1Q7Z3B3 1105 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 ADAT2Q7Z6V5 191 aaKnown RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 DSG4Q86SJ6 1040 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 FAM124AQ86V42 546 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 ZSCAN30Q86W11 494 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 TRIM59Q8IWR1 403 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 PPM1KQ8N3J5 372 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 EHBP1Q8NDI1 1231 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 MDM1Q8TC05 714 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 DQX1Q8TE96 717 aaKnown RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 NDRG1Q92597 394 aaKnown RBP6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 SMARCE1Q969G3 411 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 NXPE2Q96DL1 559 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 IFT43Q96FT9 208 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 OMDQ99983 421 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 NEUROG2Q9H2A3 272 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 THAP9Q9H5L6 903 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 EBF2Q9HAK2 575 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 GDF3Q9NR23 364 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 ARHGAP20Q9P2F6 1191 aa6.31□□□□□ -1.4
LSM3P4-201ENST00000502948 SLC12A6Q9UHW9 1150 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms