RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SPAG4Q9NPE6 437 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 COMMD8Q9NX08 183 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 CD274Q9NZQ7 290 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 MYO1DO94832 1006 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 LRPAP1P30533 357 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 METTL21CQ5VZV1 264 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 COX4I2Q96KJ9 171 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 MAN1C1Q9NR34 630 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 PLA2G4CQ9UP65 541 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 GAKO14976 1311 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 EIF2S1P05198 315 aaKnown RBP17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 GNL1P36915 607 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 NAGLUP54802 743 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 RAB15P59190 212 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 DRICH1Q6PGQ1 229 aaPredicted RBP17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 TMEM161BQ8NDZ6 487 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 TCF12Q99081 682 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 APOL2Q9BQE5 337 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 BBS2Q9BXC9 721 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 IDI2Q9BXS1 227 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 RAD21L1Q9H4I0 556 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 RMI1Q9H9A7 625 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 PNPOQ9NVS9 261 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 DPP3Q9NY33 737 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 EURLQ9NYK6 297 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 NR2E3Q9Y5X4 410 aa17.56■□□□□ 0.4
HMGXB3-201ENST00000502717 TXNP10599 105 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 AQP4P55087 323 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 CSTF3Q12996 717 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 CCDC85BQ15834 202 aaPredicted RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 KIZQ2M2Z5 673 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 BROXQ5VW32 411 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 TLDC1Q6P9B6 456 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 CPT1BQ92523 772 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 RMDN1Q96DB5 314 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 ABHD8Q96I13 439 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 CDH19Q9H159 772 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 C12orf65Q9H3J6 166 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 NOL6Q9H6R4 1146 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 ZNF180Q9UJW8 692 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 MATN2O00339 956 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 SIN3BO75182 1162 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 CDH17Q12864 832 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 GTF2H3Q13889 308 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 GPR107Q5VW38 600 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 OLFML1Q6UWY5 402 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 NPNTQ6UXI9 565 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 TAS2R42Q7RTR8 314 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 NANOGNBQ7Z5D8 188 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 SVOPQ8N4V2 548 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 RNF157Q96PX1 679 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 PDCD2LQ9BRP1 358 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 DNAJC28Q9NX36 388 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 VAV3Q9UKW4 847 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 EVPLLA8MZ36 301 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 TRAFD1O14545 582 aaPredicted RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 PMPCBO75439 489 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 CYP2C9P11712 490 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 TAL1P17542 331 aaPredicted RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 MAPK10P53779 464 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 ZACNQ401N2 412 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 ARMC3Q5W041 872 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 ACOT1Q86TX2 421 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 FAM131BQ86XD5 332 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 ARRDC4Q8NCT1 418 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 SYTL5Q8TDW5 730 aaPredicted RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 PTCD3Q96EY7 689 aaKnown RBP17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 OSBPL6Q9BZF3 934 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 RNF103O00237 685 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 PRDX6P30041 224 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 CD151P48509 253 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 STK32CQ86UX6 486 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 ZDHHC17Q8IUH5 632 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 TRIM54Q9BYV2 358 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 IKZF4Q9H2S9 585 aa17.55■□□□□ 0.4
HMGXB3-201ENST00000502717 M0R2N6 131 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 DNAJB2P25686 324 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 PSMB9P28065 219 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 GRIA3P42263 894 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 FKBP1AP62942 108 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 EPS8Q12929 822 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 MAPK11Q15759 364 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 ATP6AP1LQ52LC2 224 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 ZPBP2Q6X784 338 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 SAMD7Q7Z3H4 446 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 C10orf107Q8IVU9 208 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 SEMA4DQ92854 862 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 SH3GL1Q99961 368 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 WDR18Q9BV38 432 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 SELENONQ9NZV5 590 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 NOCTQ9UK39 431 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 TMEM150BA6NC51 233 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 DYNC1LI2O43237 492 aaPredicted RBP17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 TRUB2O95900 331 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 ERVK-10P10266 1014 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 NNMTP40261 264 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 CCNFP41002 786 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 RHBDL3P58872 404 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 POU4F1Q01851 419 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 CES3Q6UWW8 571 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms