RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 KCNK16Q96T55 309 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 FAM105AQ9NUU6 356 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 ADAM28Q9UKQ2 775 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 TRHDEQ9UKU6 1024 aa16.98■□□□□ 0.31
VCAN-204ENST00000502527 MEIS3P2A8K0S8 358 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 FGF3P11487 239 aaPredicted RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 GRK2P25098 689 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 TYK2P29597 1187 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 RPL10AP62906 217 aaKnown RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 FRG1Q14331 258 aaKnown RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 GPRIN1Q7Z2K8 1008 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 TMPRSS6Q8IU80 811 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.97■□□□□ 0.31
VCAN-204ENST00000502527 MAB21L3Q8N8X9 362 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 ZMIZ2Q8NF64 920 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 PIWIL2Q8TC59 973 aaKnown RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 AGAP3Q96P47 875 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 GAD1Q99259 594 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 ANLNQ9NQW6 1124 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 BATF3Q9NR55 127 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 CACNG4Q9UBN1 327 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 TAGLN3Q9UI15 199 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 VANGL2Q9ULK5 521 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 SORCS3Q9UPU3 1222 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 B2RBV5 119 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 H0Y3Z8 333 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 ENO1P06733 434 aaKnown RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 SERPINA6P08185 405 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 SERPINB6P35237 376 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 SLC1A6P48664 564 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 CLCNKBP51801 687 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 RABGGTBP53611 331 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 TAF11Q15544 211 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 KHDC1Q4VXA5 237 aaKnown RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 ITPRIPL1Q6GPH6 555 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 CES3Q6UWW8 571 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 TREML1Q86YW5 311 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 DNAAF3Q8N9W5 541 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
VCAN-204ENST00000502527 HDAC11Q96DB2 347 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 SMARCD1Q96GM5 515 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 FCRL3Q96P31 734 aaPredicted RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 EPAS1Q99814 870 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 COLEC11Q9BWP8 271 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 STN1Q9H668 368 aaKnown RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 CASS4Q9NQ75 786 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 ST3GAL5Q9UNP4 418 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 LRRC42Q9Y546 428 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 TIMM13Q9Y5L4 95 aaPredicted RBP16.97■□□□□ 0.31
VCAN-204ENST00000502527 TRPV2Q9Y5S1 764 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 CDY2AQ9Y6F7 541 aa16.97■□□□□ 0.31
VCAN-204ENST00000502527 I6L893 689 aaPredicted RBP16.96■□□□□ 0.31
VCAN-204ENST00000502527 ZBTB24O43167 697 aaPredicted RBP16.96■□□□□ 0.31
VCAN-204ENST00000502527 USP1O94782 785 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 CELF2O95319 508 aaKnown RBP16.96■□□□□ 0.31
VCAN-204ENST00000502527 PROCP04070 461 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 SERPINE1P05121 402 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 CYP2B6P20813 491 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 PCSK1P29120 753 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 SPRP35270 261 aaPredicted RBP16.96■□□□□ 0.31
VCAN-204ENST00000502527 PGM1P36871 562 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 GALNT2Q10471 571 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 TEDDM1Q5T9Z0 273 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 PAXIP1Q6ZW49 1069 aaPredicted RBP16.96■□□□□ 0.31
VCAN-204ENST00000502527 TMEM135Q86UB9 458 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 PPP4R1Q8TF05 950 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 ZNF669Q96BR6 464 aaPredicted RBP16.96■□□□□ 0.31
VCAN-204ENST00000502527 VAT1Q99536 393 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 GORASP1Q9BQQ3 440 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 GBA3Q9H227 469 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 FAM96AQ9H5X1 160 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 WDCPQ9H6R7 721 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 CHST12Q9NRB3 414 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 DNAJC16Q9Y2G8 782 aa16.96■□□□□ 0.31
VCAN-204ENST00000502527 MAGEB16A2A368 324 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 SPECC1L-ADORA2AF8WAN1 911 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 MAGEC1O60732 1142 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 RPL9P32969 192 aaKnown RBP16.95■□□□□ 0.3
VCAN-204ENST00000502527 PTDSS1P48651 473 aaKnown RBP16.95■□□□□ 0.3
VCAN-204ENST00000502527 CXCR3P49682 368 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 ALDH18A1P54886 795 aaKnown RBP16.95■□□□□ 0.3
VCAN-204ENST00000502527 KPNB1Q14974 876 aaKnown RBP16.95■□□□□ 0.3
VCAN-204ENST00000502527 PCLAFQ15004 111 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 CCDC153Q494R4 210 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 KCTD11Q693B1 232 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 RSPH3Q86UC2 560 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 NPWQ8N729 165 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 ISL2Q96A47 359 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 RBBP8Q99708 897 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 CCDC106Q9BWC9 280 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 IL1RAPL1Q9NZN1 696 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 STOML1Q9UBI4 398 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 TSC2P49815 1807 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 HHLA1C9JL84 531 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 KPNA6O60684 536 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 USP12O75317 370 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 AMHP03971 560 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 RGS2P41220 211 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 MAGEA12P43365 314 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 NPY2RP49146 381 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms