RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 E7ENQ6 273 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 OPA1O60313 960 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 IGLV3-27P01718 113 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3HP0C7X1 549 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TRIM49P0CI25 452 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TRIM49CP0CI26 452 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 C5AR1P21730 350 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 DRD3P35462 400 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 METAP1P53582 386 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 RAD23BP54727 409 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 SRSF1Q07955 248 aaKnown RBP eCLIP16.19■□□□□ 0.18
HDAC6-236ENST00000498808 CUL4AQ13619 759 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 KIAA1614Q5VZ46 1190 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 CEP135Q66GS9 1140 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3GQ6DHY5 549 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3CQ6IPX1 549 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 MMS22LQ6ZRQ5 1243 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 TBC1D3Q8IZP1 549 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-236ENST00000498808 STK40Q8N2I9 435 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 ZNF557Q8N988 423 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-236ENST00000498808 OR4C6Q8NH72 309 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 FAM131CQ96AQ9 280 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 VCPIP1Q96JH7 1222 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 DEPDC7Q96QD5 511 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 DPH1Q9BZG8 443 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 IRX2Q9BZI1 471 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-236ENST00000498808 CAAP1Q9H8G2 361 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 POLR1BQ9H9Y6 1135 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 MAGEF1Q9HAY2 307 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 SLCO3A1Q9UIG8 710 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 ERVW-1Q9UQF0 538 aa16.19■□□□□ 0.18
HDAC6-236ENST00000498808 EDDM13A0A1B0GTR0 161 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 A0A1B0GVM2 712 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 SPTLC2O15270 562 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 KLRC4O43908 158 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 CSO75390 466 aaKnown RBP16.18■□□□□ 0.18
HDAC6-236ENST00000498808 ADH1BP00325 375 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 GIMD1P0DJR0 217 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 MAT2AP31153 395 aaKnown RBP16.18■□□□□ 0.18
HDAC6-236ENST00000498808 AFMP43652 599 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 VAMP7P51809 220 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 RPS24P62847 133 aaKnown RBP16.18■□□□□ 0.18
HDAC6-236ENST00000498808 ADIGQ0VDE8 80 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 OVGP1Q12889 678 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 FSCBQ5H9T9 825 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 NADSYN1Q6IA69 706 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 PTPRN2Q92932 1015 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 TATDN2Q93075 761 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 DNAI2Q9GZS0 605 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 CISHQ9NSE2 258 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 UCKL1Q9NWZ5 548 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 CYTH4Q9UIA0 394 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 MTMR6Q9Y217 621 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 CA5BQ9Y2D0 317 aa16.18■□□□□ 0.18
HDAC6-236ENST00000498808 TDRD6O60522 2096 aaKnown RBP16.18■□□□□ 0.18
HDAC6-236ENST00000498808 COL27A1Q8IZC6 1860 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-236ENST00000498808 A0A1W2PNU3 283 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 K7ENP7 123 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 PDXKO00764 312 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 XPO1O14980 1071 aaKnown RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 POLR2DO15514 142 aaKnown RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 IRAK2O43187 625 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 ACSL4O60488 711 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 MAGEC1O60732 1142 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 PPP6R2O75170 966 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 IL1BP01584 269 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 SRPRAP08240 638 aaKnown RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 DGKAP23743 735 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 MZF1P28698 734 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 CSRP3P50461 194 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 GOLGA7BQ2TAP0 167 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 PITRM1Q5JRX3 1037 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 MSANTD2Q6P1R3 559 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 INO80CQ6PI98 192 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 PRICKLE2Q7Z3G6 844 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 TMC6Q7Z403 805 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 PRPF39Q86UA1 669 aaKnown RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 GRAMD1CQ8IYS0 662 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 HJURPQ8NCD3 748 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-236ENST00000498808 MMRN2Q9H8L6 949 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 LRRC4Q9HBW1 653 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 THSD1Q9NS62 852 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 ABCC13Q9NSE7 274 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 DMTF1Q9Y222 760 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 FRMD4BQ9Y2L6 1034 aa16.17■□□□□ 0.18
HDAC6-236ENST00000498808 FFAR2O15552 330 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 RTN2O75298 545 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 NEFLP07196 543 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 CKMT1AP12532 417 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 MYF5P13349 255 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 SLC11A2P49281 568 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 SLC8A3P57103 927 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 SKOR1P84550 965 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 STAT4Q14765 748 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 CARNMT1Q8N4J0 409 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 IPO9Q96P70 1041 aaKnown RBP16.16■□□□□ 0.18
HDAC6-236ENST00000498808 TRIM4Q9C037 500 aa16.16■□□□□ 0.18
HDAC6-236ENST00000498808 TSPAN16Q9UKR8 245 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms