RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ARFGAP1Q8N6T3 406 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 EMC1Q8N766 993 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 ZSCAN1Q8NBB4 408 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 RNF149Q8NC42 400 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 BBOF1Q8ND07 529 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 IL17RDQ8NFM7 739 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 JOSD2Q8TAC2 188 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 RBM41Q96IZ5 413 aaKnown RBP9.21□□□□□ -0.94
FN1-227ENST00000498719 C12orf42Q96LP6 360 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 CCDC77Q9BR77 488 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 SPON1Q9HCB6 807 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
FN1-227ENST00000498719 ARL2BPQ9Y2Y0 163 aa9.21□□□□□ -0.94
FN1-227ENST00000498719 CEP350Q5VT06 3117 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 IGKV6D-21A0A0A0MT36 114 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ATP2A1O14983 1001 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 STAM2O75886 525 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ZBTB7AO95365 584 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 KRT16P08779 473 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 KRT15P19012 456 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 RPA3P35244 121 aaPredicted RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 IGFALSP35858 605 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 STAT5BP51692 787 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 VCPP55072 806 aaKnown RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 CDH8P55286 799 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 BNIP1Q12981 228 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 PDIA2Q13087 525 aaKnown RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 SV2CQ496J9 727 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ACCSLQ4AC99 568 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 PREPLQ4J6C6 727 aaPredicted RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 PTPN20Q4JDL3 420 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 MSS51Q4VC12 460 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 KRTCAP3Q53RY4 240 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 RNASEH2BQ5TBB1 312 aaKnown RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 ANKRD22Q5VYY1 191 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 DENND1BQ6P3S1 775 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 UNC5AQ6ZN44 842 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CCDC91Q7Z6B0 441 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 LRRTM4Q86VH4 590 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ERICH1Q86X53 443 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ECHDC2Q86YB7 292 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CPOQ8IVL8 374 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 TMEM192Q8IY95 271 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 AVL9Q8NBF6 648 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 TRAPPC12Q8WVT3 735 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CFAP57Q96MR6 1250 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 YME1L1Q96TA2 773 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 GAS2L1Q99501 681 aaPredicted RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 TREX2Q9BQ50 279 aaPredicted RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 B3GNT5Q9BYG0 378 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 PITPNM3Q9BZ71 974 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 PHACTR1Q9C0D0 580 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 PAPOLBQ9NRJ5 636 aaKnown RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 ZNF232Q9UNY5 417 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 STK38LQ9Y2H1 464 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 C3orf70A6NLC5 250 aaPredicted RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 B4GALT5O43286 388 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 TBX1O43435 398 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CSDE1O75534 798 aaKnown RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 TOM1L1O75674 476 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CALB1P05937 261 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 MSL3P1P0C860 447 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 FGFR1P11362 822 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CD19P15391 556 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 NQO1P15559 274 aaKnown RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 PBLDP30039 288 aaPredicted RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 SSTR1P30872 391 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ICAM3P32942 547 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CETN2P41208 172 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ASPAP45381 313 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 COPS2P61201 443 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 DSG1Q02413 1049 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 LRRC32Q14392 662 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ACAP1Q15027 740 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 TXNDC11Q6PKC3 985 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 USP51Q70EK9 711 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 WDR49Q8IV35 697 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ZNF527Q8NB42 609 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 TMEM35BQ8NCS4 154 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 ACTL9Q8TC94 416 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 KLHL29Q96CT2 875 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CNDP1Q96KN2 507 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 C12orf65Q9H3J6 166 aaKnown RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 TRABDQ9H4I3 376 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 CHCHD3Q9NX63 227 aaKnown RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 BTBD7Q9P203 1132 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 HECAQ9UBI9 543 aaPredicted RBP9.2□□□□□ -0.94
FN1-227ENST00000498719 INVSQ9Y283 1065 aa9.2□□□□□ -0.94
FN1-227ENST00000498719 TRIP11Q15643 1979 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 TCRBV7S3A2A0A539 114 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 SOWAHBA6NEL2 793 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 LRCH4O75427 683 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 KRT19P08727 400 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 ABHD2P08910 425 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 HOXC6P09630 235 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 RPS12P25398 132 aaKnown RBP9.19□□□□□ -0.94
FN1-227ENST00000498719 PSMA2P25787 234 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 MAP2K2P36507 400 aa9.19□□□□□ -0.94
FN1-227ENST00000498719 GSCP56915 257 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms