RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TRIM27P14373 513 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ITGAXP20702 1163 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 MAP4P27816 1152 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 POU1F1P28069 291 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SEPHS1P49903 392 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 NR0B1P51843 470 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 CDH6P55285 790 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ABCE1P61221 599 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 ZNF45Q02386 682 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 GABPAQ06546 454 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ELP6Q0PNE2 266 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 TROAPQ12815 778 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 MVPQ14764 893 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 IRF4Q15306 451 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 LLGL1Q15334 1064 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 RBMS2Q15434 407 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 ATG14Q6ZNE5 492 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 P2RY8Q86VZ1 359 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ZNF786Q8N393 782 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 OR5M8Q8NGP6 311 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CASKIN2Q8WXE0 1202 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 RSAD2Q8WXG1 361 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 OPALINQ96PE5 141 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 MAP7D2Q96T17 732 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 IFT27Q9BW83 186 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 GCOM2Q9BZD3 368 aaPredicted RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 POLR1EQ9GZS1 481 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 XYLT2Q9H1B5 865 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 UPF3AQ9H1J1 476 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 SLC25A18Q9H1K4 315 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 DPEP2Q9H4A9 486 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 FAM83DQ9H4H8 585 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SMURF1Q9HCE7 757 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 BRMS1Q9HCU9 246 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ABI2Q9NYB9 513 aaPredicted RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 DDX20Q9UHI6 824 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 MAPRE3Q9UPY8 281 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SIRT4Q9Y6E7 314 aaPredicted RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 ITGB4P16144 1822 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 WASHC2AQ641Q2 1341 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 MYPNQ86TC9 1320 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 LOC101059948A0A1B0GTJ6 334 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 DAPL1A0PJW8 107 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 KRBA1A5PL33 1030 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 KIF3BO15066 747 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 MARCH6O60337 910 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 HMMRO75330 724 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 POP7O75817 140 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 PRSS2P07478 247 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CD48P09326 243 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CLTBP09497 229 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 RHCEP18577 417 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 LIG1P18858 919 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 MAOAP21397 527 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SHC1P29353 583 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CCT6AP40227 531 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 ASPAP45381 313 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 RNF4P78317 190 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 GPC5P78333 572 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 TMF1P82094 1093 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 IFRD2Q12894 506 aaPredicted RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 EIF2B1Q14232 305 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 NFE2L1Q14494 772 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SETDB1Q15047 1291 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 UBE3CQ15386 1083 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 TAB1Q15750 504 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ETFDHQ16134 617 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 RPE65Q16518 533 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 MAPK6Q16659 721 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ECSCRQ19T08 205 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ZNF630Q2M218 657 aaPredicted RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 LSM12Q3MHD2 195 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 ANKRD20A4Q4UJ75 823 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 GPRC6AQ5T6X5 926 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ANKRD20A1Q5TYW2 823 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 KIAA1161Q6NSJ0 714 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 PGM2L1Q6PCE3 622 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CD300LGQ6UXG3 332 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 BRD3OSQ6XYD6 125 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SYT10Q6XYQ8 523 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 IRF2BP2Q7Z5L9 587 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CPLX4Q7Z7G2 160 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 C10orf67Q8IYJ2 551 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CCDC63Q8NA47 563 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 UXS1Q8NBZ7 420 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 C3orf58Q8NDZ4 430 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 EXD1Q8NHP7 514 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SOCS4Q8WXH5 440 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 C22orf15Q8WYQ4 148 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CCT6BQ92526 530 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ALG3Q92685 438 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ARHGEF2Q92974 986 aaKnown RBP1.49□□□□□ -2.17
XRN1-214ENST00000498077 CYFIP2Q96F07 1278 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 SLC9A7Q96T83 725 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CLSTN3Q9BQT9 956 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 CENPKQ9BS16 269 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 MRIQ9BWK5 157 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 KCNK15Q9H427 330 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 RAD21L1Q9H4I0 556 aa1.49□□□□□ -2.17
XRN1-214ENST00000498077 ACSS3Q9H6R3 686 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms