RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 GIMAP2Q9UG22 337 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 FBXL7Q9UJT9 491 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 COA3Q9Y2R0 106 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 SCN1AP35498 2009 aa6.28□□□□□ -1.4
TMEM39A-212ENST00000497993 MUC6Q6W4X9 2439 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 TECTAO75443 2155 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 PIEZO1Q92508 2521 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 XIRP2A4UGR9 3374 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 NOTCH4Q99466 2003 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 A0A0U1RQF3 1178 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 ARHGAP6O43182 974 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 CHMP2AO43633 222 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 USO1O60763 962 aaKnown RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 RTN3O95197 1032 aaPredicted RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 BMP15O95972 392 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 VTNP04004 478 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 CHMP24386 653 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 AXLP30530 894 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 HOXC13P31276 330 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 ARL2P36404 184 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 PIK3CAP42336 1068 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 SUMO3P55854 103 aaPredicted RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 POLE2P56282 527 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 NLRP11P59045 1033 aaKnown RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 PTENP60484 403 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 NKX6-1P78426 367 aaPredicted RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 UBE3AQ05086 875 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 DRP2Q13474 957 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 LAPTM5Q13571 262 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 IL10RAQ13651 578 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 MXD4Q14582 209 aaPredicted RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 EMC2Q15006 297 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 FAM187BQ17R55 369 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 EPC2Q52LR7 807 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 RTP2Q5QGT7 225 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 ZBTB41Q5SVQ8 909 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 UBXN11Q5T124 520 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 MCTP1Q6DN14 999 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 CYP2R1Q6VVX0 501 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 OTUD6AQ7L8S5 288 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 CATSPER3Q86XQ3 398 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 CPNE8Q86YQ8 564 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 CPOQ8IVL8 374 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 LILRA2Q8N149 483 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 FAM184AQ8NB25 1140 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 OR14C36Q8NHC7 312 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 TCP11Q8WWU5 503 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 PSPC1Q8WXF1 523 aaKnown RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 KAT5Q92993 513 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 CCDC51Q96ER9 411 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 MAP6Q96JE9 813 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 RADILQ96JH8 1075 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 SPATA17Q96L03 361 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 MMTAG2Q9BU76 263 aaKnown RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 CDADC1Q9BWV3 514 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 MRPL9Q9BYD2 267 aaKnown RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 PLSCR4Q9NRQ2 329 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 KRT84Q9NSB2 600 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 AGPAT5Q9NUQ2 364 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 RGL1Q9NZL6 768 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 AFF4Q9UHB7 1163 aaKnown RBP6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 VPS28Q9UK41 221 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 ST3GAL5Q9UNP4 418 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 PTPRDP23468 1912 aa6.27□□□□□ -1.41
TMEM39A-212ENST00000497993 C5orf42Q9H799 3197 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 UBA6A0AVT1 1052 aaPredicted RBP6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 TMEM150BA6NC51 233 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 MASP2O00187 686 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 KRIT1O00522 736 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 FGF10O15520 208 aaPredicted RBP6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 THAP12O43422 761 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 TADA3O75528 432 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 APOL3O95236 402 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 APOA4P06727 396 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 KITP10721 976 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 HNRNPLP14866 589 aaKnown RBP eCLIP6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 SFPQP23246 707 aaKnown RBP eCLIP6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 PSMA3P25788 255 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 GJB2P29033 226 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 MCM7P33993 719 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 BMPR1AP36894 532 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 NPEPPSP55786 919 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 ADRM1Q16186 407 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 IL17AQ16552 155 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 TIGD5Q53EQ6 642 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 CATSPEREQ5SY80 951 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 PLA2G4FQ68DD2 849 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 LMBRD2Q68DH5 695 aaPredicted RBP6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 SLC30A6Q6NXT4 461 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 CEP68Q76N32 757 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 MRPL10Q7Z7H8 261 aaKnown RBP6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 ECHDC2Q86YB7 292 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 HSCBQ8IWL3 235 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 LMNTD2Q8IXW0 634 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 LRRC71Q8N4P6 559 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 MCPH1Q8NEM0 835 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 SH3RF2Q8TEC5 729 aa6.26□□□□□ -1.41
TMEM39A-212ENST00000497993 C18orf8Q96DM3 657 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms