RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 DGKIO75912 1065 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 IGFBP6P24592 240 aaPredicted RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 SKIV2L2P42285 1042 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 SULT1E1P49888 294 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 CCNG1P51959 295 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 KHDC1Q4VXA5 237 aaKnown RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 SLC45A4Q5BKX6 768 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 EFHC2Q5JST6 749 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 SCYL2Q6P3W7 929 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 NPNTQ6UXI9 565 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 METTL23Q86XA0 190 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 SIX6OS1Q8N1H7 587 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 FAM71DQ8N9W8 422 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 MCUQ8NE86 351 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 GRAMD1AQ96CP6 724 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 KLF6Q99612 283 aaPredicted RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 ADAM2Q99965 735 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 CENPOQ9BU64 300 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 TRIM62Q9BVG3 475 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 DMAP1Q9NPF5 467 aaPredicted RBP11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 GPATCH2LQ9NWQ4 482 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 STARD13Q9Y3M8 1113 aa11.89□□□□□ -0.51
SNRNP200-208ENST00000497539 GOLGA8RI6L899 631 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 CLDN5O00501 218 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 FYNP06241 537 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 CKBP12277 381 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 ACAT1P24752 427 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 TKTL1P51854 596 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 CSE1LP55060 971 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 PLOD1Q02809 727 aaPredicted RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 DSC1Q08554 894 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 SEMA3BQ13214 749 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 CAMK2BQ13554 666 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 MAPRE1Q15691 268 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 MAP7D1Q3KQU3 841 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 PLEKHG4Q58EX7 1191 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 ANKRD22Q5VYY1 191 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 LHX8Q68G74 356 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 LRRC8CQ8TDW0 803 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 DENND1AQ8TEH3 1009 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 UCMAQ8WVF2 138 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 SREK1Q8WXA9 508 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 MED10Q9BTT4 135 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 CCDC68Q9H2F9 335 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 TRMT13Q9NUP7 481 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 SH3GLB1Q9Y371 365 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 MYBPHLA2RUH7 354 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 SPAG6O75602 509 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 TMEM63AO94886 807 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 IFNB1P01574 187 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 FOSL1P15407 271 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 FUT4P22083 530 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 MXRA7P84157 204 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 SPARCL1Q14515 664 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 ARHGEF6Q15052 776 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 PAFAH1B3Q15102 231 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 PARP6Q2NL67 630 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 DEFB115Q30KQ5 88 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 NCBP2-AS2Q69YL0 99 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 RFX8Q6ZV50 586 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 OTOAQ7RTW8 1153 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 ANKMY2Q8IV38 441 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 AGGF1Q8N302 714 aaeCLIP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 MRPL46Q9H2W6 279 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 SSU72Q9NP77 194 aaKnown RBP11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 SENP1Q9P0U3 644 aa11.88□□□□□ -0.51
SNRNP200-208ENST00000497539 CLUHO75153 1309 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 H3BRJ5 948 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 EDF1O60869 148 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 WFS1O76024 890 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 GSTA2P09210 222 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 TPSB2P20231 275 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 PHBP35232 272 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 DPYSQ14117 519 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 TPSAB1Q15661 275 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 CNGA3Q16281 694 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 TMEM154Q6P9G4 183 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 LRRC43Q8N309 656 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 C10orf82Q8WW14 230 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 MYLPFQ96A32 169 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 NDNQ99608 321 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 MIPEPQ99797 713 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 WDR83Q9BRX9 315 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 C10orf88Q9H8K7 445 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 XPO7Q9UIA9 1087 aaKnown RBP11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 SLC30A1Q9Y6M5 507 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 TANC1Q9C0D5 1861 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 CASTOR2A6NHX0 329 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 H7C0C1 242 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 CCDC159P0C7I6 412 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 MAGEA3P43357 314 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 ATP5OP48047 213 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 MAP3K7CLP57077 242 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 GPX6P59796 221 aa11.87□□□□□ -0.51
SNRNP200-208ENST00000497539 GAD2Q05329 585 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms