RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TRPC7Q9HCX4 862 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ARMC1Q9NVT9 282 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 POLR3BQ9NW08 1133 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 RMND1Q9NWS8 449 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 PRR13Q9NZ81 148 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SAMD15Q9P1V8 674 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ATP6V1HQ9UI12 483 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 GJD2Q9UKL4 321 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CBLCQ9ULV8 474 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 STX8Q9UNK0 236 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 DNAJC16Q9Y2G8 782 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 RPH3AQ9Y2J0 694 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 KCTD3Q9Y597 815 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKRD30AQ9BXX3 1397 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TEX51A0A1B0GUA7 166 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 HSBP1L1C9JCN9 74 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 BTBD19C9JJ37 291 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKRD65E5RJM6 399 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 H0YIV9 168 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 AGRPO00253 132 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 MATN2O00339 956 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 RASSF9O75901 435 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 DNAJB5O75953 348 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 PLATP00750 562 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 C8BP07358 591 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ANPEPP15144 967 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CASTP20810 708 aaKnown RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SYT1P21579 422 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 GLDCP23378 1020 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 IGFBP6P24592 240 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 PPM1AP35813 382 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC26A3P40879 764 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 MAPK10P53779 464 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 YBEYP58557 167 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 GFPT1Q06210 699 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ACTN3Q08043 901 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SCRN3Q0VDG4 424 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 FOXO1Q12778 655 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 BMPR2Q13873 1038 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 HERC3Q15034 1050 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ALX1Q15699 326 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SGSM1Q2NKQ1 1148 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 AARS2Q5JTZ9 985 aaKnown RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 STEAP3Q658P3 488 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 OLFML2BQ68BL8 750 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC30A10Q6XR72 485 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 MACC1Q6ZN28 852 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CATSPERGQ6ZRH7 1159 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 MTDHQ86UE4 582 aaKnown RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKLE2Q86XL3 938 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ZDHHC17Q8IUH5 632 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 OR8H3Q8N146 312 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 EFHBQ8N7U6 833 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF680Q8NEM1 530 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 OR10Z1Q8NGY1 313 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 HUS1BQ8NHY5 278 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 FANK1Q8TC84 345 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ASZ1Q8WWH4 475 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 SYN2Q92777 582 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 HSPBAP1Q96EW2 488 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 VCPIP1Q96JH7 1222 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TMX3Q96JJ7 454 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 PPP1R13BQ96KQ4 1090 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 C7orf34Q96L11 122 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CEP170P1Q96L14 293 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 RIPOR3Q96MK2 946 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TUBGCP5Q96RT8 1024 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 BTBD2Q9BX70 525 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 MVB12BQ9H7P6 319 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 EBF2Q9HAK2 575 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CRTAC1Q9NQ79 661 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 ASNSD1Q9NWL6 643 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 NSMCE4AQ9NXX6 385 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 COQ3Q9NZJ6 369 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 AKAP7Q9P0M2 348 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TBC1D29Q9UFV1 150 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CD300AQ9UGN4 299 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CYTH4Q9UIA0 394 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 MAGED2Q9UNF1 606 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 TIMM13Q9Y5L4 95 aaPredicted RBP3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 DMRT1Q9Y5R6 373 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CACNG2Q9Y698 323 aa3.21□□□□□ -1.9
SNRNP48-202ENST00000496946 CLASP1Q7Z460 1538 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NPATQ14207 1427 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 EIF3AQ14152 1382 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NESP48681 1621 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PTPDC1A2A3K4 754 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 LCHNA4D1U4 455 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 VWA3AA6NCI4 1184 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM83GA6ND36 823 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DBX1A6NMT0 343 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 DDX39AO00148 427 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NDUFS8O00217 210 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PER2O15055 1255 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 TP73O15350 636 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PRPSAP2O60256 369 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 NOL3O60936 208 aaKnown RBP3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 PIGNO95427 931 aa3.2□□□□□ -1.9
SNRNP48-202ENST00000496946 SOD2P04179 222 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms