RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 SORCS1Q8WY21 1168 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 SHC3Q92529 594 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 SNX19Q92543 992 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 TOE1Q96GM8 510 aaKnown RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 PPP1R13BQ96KQ4 1090 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 BTN2A3PQ96KV6 586 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 PPP1R9BQ96SB3 815 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 GPR174Q9BXC1 333 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 C1QTNF2Q9BXJ5 285 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 MKRN2Q9H000 416 aaKnown RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 SLC6A17Q9H1V8 727 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 ITM2CQ9NQX7 267 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 ASNSD1Q9NWL6 643 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 WSB2Q9NYS7 404 aaPredicted RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 COX16Q9P0S2 106 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 USP36Q9P275 1121 aaKnown RBP8.12□□□□□ -1.11
SRRM1-220ENST00000496882 ANGPTL2Q9UKU9 493 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 CLEC4EQ9ULY5 219 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 NCKAP1Q9Y2A7 1128 aa8.12□□□□□ -1.11
SRRM1-220ENST00000496882 DCHS1Q96JQ0 3298 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 KCNJ18B7U540 433 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 PAPSS1O43252 624 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 OPHN1O60890 802 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 LUC7L3O95232 432 aaKnown RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 S1PR4O95977 384 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 CEACAM1P13688 526 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 HLA-EP13747 358 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 CSRP1P21291 193 aaKnown RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 EEF1GP26641 437 aaKnown RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 SLC6A4P31645 630 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 CCR1P32246 355 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 TPMTP51580 245 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 OXCT1P55809 520 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 ZBTB16Q05516 673 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 ZNF252P-AS1Q0IIN9 211 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 CAMK2GQ13555 558 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 KCNJ12Q14500 433 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 DPCR1Q3MIW9 517 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 HSP90AA4PQ58FG1 418 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 FAM133BQ5BKY9 247 aaKnown RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 ZC3H12AQ5D1E8 599 aaKnown RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 MS4A13Q5J8X5 152 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 N4BP2L1Q5TBK1 243 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 SH3PXD2AQ5TCZ1 1133 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 PEAR1Q5VY43 1037 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 RAP1GAP2Q684P5 730 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 TMEM215Q68D42 235 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 ZNF776Q68DI1 518 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 ZDHHC17Q8IUH5 632 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 TMEM35BQ8NCS4 154 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 C1orf131Q8NDD1 294 aaKnown RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 CADM4Q8NFZ8 388 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 FIBINQ8TAL6 211 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 GANCQ8TET4 914 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 SLC39A13Q96H72 371 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 ZNF419Q96HQ0 510 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 FCRL2Q96LA5 508 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 ZDHHC5Q9C0B5 715 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 NUCKS1Q9H1E3 243 aaKnown RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 MIR1-1HGQ9H1L0 117 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 PCED1AQ9H1Q7 454 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 CD248Q9HCU0 757 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 TMEM74BQ9NUR3 256 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 TMEM51Q9NW97 253 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 DDIT4Q9NX09 232 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 RRN3Q9NYV6 651 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 KIAA1522Q9P206 1035 aaPredicted RBP8.11□□□□□ -1.11
SRRM1-220ENST00000496882 STAP1Q9ULZ2 295 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 SCML1Q9UN30 329 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 PAXBP1Q9Y5B6 917 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 SDK1Q7Z5N4 2213 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 WDR87Q6ZQQ6 2873 aa8.11□□□□□ -1.11
SRRM1-220ENST00000496882 CEP250Q9BV73 2442 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 PLXND1Q9Y4D7 1925 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 A0A1B0GTW7 788 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 BECN2A8MW95 431 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 KCNU1A8MYU2 1149 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 CDX4O14627 284 aaPredicted RBP8.1□□□□□ -1.11
SRRM1-220ENST00000496882 TM4SF5O14894 197 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 FYNP06241 537 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 SRPRAP08240 638 aaKnown RBP8.1□□□□□ -1.11
SRRM1-220ENST00000496882 TACR2P21452 398 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 CD70P32970 193 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 CSKP41240 450 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 SGSHP51688 502 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 COPAP53621 1224 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 RPS24P62847 133 aaKnown RBP8.1□□□□□ -1.11
SRRM1-220ENST00000496882 SULT2A1Q06520 285 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 NME3Q13232 169 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 ZNF211Q13398 564 aaPredicted RBP8.1□□□□□ -1.11
SRRM1-220ENST00000496882 SLC12A1Q13621 1099 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 TEAD4Q15561 434 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 FKBP15Q5T1M5 1219 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 DCAF12L1Q5VU92 463 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 SYPL2Q5VXT5 272 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 NADSYN1Q6IA69 706 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 SASS6Q6UVJ0 657 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 FAM183BPQ6ZVS7 135 aa8.1□□□□□ -1.11
SRRM1-220ENST00000496882 KIAA0907Q7Z7F0 614 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms