RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 CD8B2A6NJW9 211 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 EFCAB8A8MWE9 144 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 CYP3A7P24462 503 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 ME1P48163 572 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 THBS3P49746 956 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 PNLIPRP1P54315 467 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 AP2B1P63010 937 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 B4GALNT1Q00973 533 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 SRSF1Q07955 248 aaKnown RBP eCLIP4.23□□□□□ -1.73
CD46-218ENST00000496723 RPS6KA2Q15349 733 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 SULT6B1Q6IMI4 303 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 C9orf47Q6ZRZ4 202 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 RAB11FIP2Q7L804 512 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 ARFGAP1Q8N6T3 406 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 OR52N4Q8NGI2 321 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 PIMREGQ9BSJ6 248 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 TMEM120AQ9BXJ8 343 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 PABPC3Q9H361 631 aaKnown RBP4.23□□□□□ -1.73
CD46-218ENST00000496723 ELAC1Q9H777 363 aaKnown RBP4.23□□□□□ -1.73
CD46-218ENST00000496723 MLXIPQ9HAP2 919 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 UTS2RQ9UKP6 389 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 PCDHA10Q9Y5I2 948 aa4.23□□□□□ -1.73
CD46-218ENST00000496723 COPG1Q9Y678 874 aaKnown RBP4.23□□□□□ -1.73
CD46-218ENST00000496723 A0A1W2PPC1 479 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 DPPA5A6NC42 116 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 MBD3L5A6NJ08 208 aaPredicted RBP4.22□□□□□ -1.73
CD46-218ENST00000496723 FAM90A8PA6NJQ4 464 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 PRPF4O43172 522 aaKnown RBP eCLIP4.22□□□□□ -1.73
CD46-218ENST00000496723 NFATC1O95644 943 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 FAM90A13PP0C7W8 464 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 FAM90A24PP0C7X0 464 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 CIITAP33076 1130 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 CCDC174Q6PII3 467 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 LRIG3Q6UXM1 1119 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 CACNA2D3Q8IZS8 1091 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 PAQR4Q8N4S7 273 aaPredicted RBP4.22□□□□□ -1.73
CD46-218ENST00000496723 ENAHQ8N8S7 591 aaPredicted RBP4.22□□□□□ -1.73
CD46-218ENST00000496723 EXD3Q8N9H8 876 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 SLC44A5Q8NCS7 719 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 MPLKIPQ8TAP9 179 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 ATP2A3Q93084 1043 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 LTV1Q96GA3 475 aaPredicted RBP4.22□□□□□ -1.73
CD46-218ENST00000496723 RPS6KC1Q96S38 1066 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 AAMDCQ9H7C9 122 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 SEPSECSQ9HD40 501 aaKnown RBP4.22□□□□□ -1.73
CD46-218ENST00000496723 THSD1Q9NS62 852 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 POT1Q9NUX5 634 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 MSRB1Q9NZV6 116 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 ZNF112Q9UJU3 913 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 AGO2Q9UKV8 859 aaKnown RBP4.22□□□□□ -1.73
CD46-218ENST00000496723 C19orf53Q9UNZ5 99 aaPredicted RBP4.22□□□□□ -1.73
CD46-218ENST00000496723 COG5Q9UP83 839 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 LZTS1Q9Y250 596 aa4.22□□□□□ -1.73
CD46-218ENST00000496723 ZNF335Q9H4Z2 1342 aaPredicted RBP4.21□□□□□ -1.73
CD46-218ENST00000496723 KIR2DS5A0A0G2JLQ3 304 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 ZNF814B7Z6K7 855 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 KIR2DS3K7RE56 304 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 TLX3O43711 291 aaPredicted RBP4.21□□□□□ -1.74
CD46-218ENST00000496723 ALPLP05186 524 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 RCAN1P53805 252 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 BIRC2Q13490 618 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 DLGAP5Q15398 846 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 TBRG1Q3YBR2 411 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 LEXMQ3ZCV2 418 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 GALNTL6Q49A17 601 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 KIAA1755Q5JYT7 1200 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 C10orf62Q5T681 223 aaPredicted RBP4.21□□□□□ -1.74
CD46-218ENST00000496723 TTC22Q5TAA0 569 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 DLK2Q6UY11 383 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 RRAGAQ7L523 313 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 MDGA2Q7Z553 956 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 STT3BQ8TCJ2 826 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 CPT1BQ92523 772 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 C3orf49Q96BT1 292 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 ADAD1Q96M93 576 aaKnown RBP4.21□□□□□ -1.74
CD46-218ENST00000496723 MAGEH1Q9H213 219 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 VPS33BQ9H267 617 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 SEMA4BQ9NPR2 832 aaPredicted RBP4.21□□□□□ -1.74
CD46-218ENST00000496723 GRHPRQ9UBQ7 328 aa4.21□□□□□ -1.74
CD46-218ENST00000496723 CXorf65A6NEN9 183 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 HMX3A6NHT5 357 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 RHODO00212 210 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 TULP3O75386 442 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 HEXIM1O94992 359 aaKnown RBP4.2□□□□□ -1.74
CD46-218ENST00000496723 WNT1P04628 370 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 PSG1P11464 419 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 SERPINA4P29622 427 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 CHKAP35790 457 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 PCP4P48539 62 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 CDK7P50613 346 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 FOXO1Q12778 655 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 ERV3-1Q14264 604 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 TIGD6Q17RP2 521 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 SMTNL2Q2TAL5 461 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 TUBB8Q3ZCM7 444 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 MANEAQ5SRI9 462 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 C10orf76Q5T2E6 689 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 ISM2Q6H9L7 571 aa4.2□□□□□ -1.74
CD46-218ENST00000496723 KIAA1324Q6UXG2 1013 aaKnown RBP4.2□□□□□ -1.74
CD46-218ENST00000496723 COLCA1Q6ZS62 124 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms