RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 MTMR3Q13615 1198 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 STK11Q15831 433 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 GOLGA7BQ2TAP0 167 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 DCAF4L1Q3SXM0 396 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 SGO2Q562F6 1265 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 FAM102AQ5T9C2 384 aaPredicted RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 OR6B2Q6IFH4 312 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 C1orf229Q6ZS94 237 aaPredicted RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 XYLT1Q86Y38 959 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 FBXO25Q8TCJ0 367 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 SLC2A14Q8TDB8 520 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 MAIP1Q8WWC4 291 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 HNRNPABQ99729 332 aaKnown RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 ADAM2Q99965 735 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 TTPALQ9BTX7 342 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 WNT8AQ9H1J5 351 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 GDF3Q9NR23 364 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 CNTN3Q9P232 1028 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 HPCAL4Q9UM19 191 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 Q9Y3F1 56 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 SYNJ2BP-COX16A0A087WUM0 186 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 LRRD1A4D1F6 860 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 ARL5CA6NH57 179 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 M0QZ92 97 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 PIRO00625 290 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 B4GALT3O60512 393 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 LRCH4O75427 683 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 LCP1P13796 627 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 MX2P20592 715 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 ALAS2P22557 587 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 PRKACBP22694 351 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 PSMA2P25787 234 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 GNL1P36915 607 aaPredicted RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 BRCC3P46736 316 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 NDUFV1P49821 464 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 ACLYP53396 1101 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 DPYSQ14117 519 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 MBTPS1Q14703 1052 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 TMEM31Q5JXX7 168 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 WDR45BQ5MNZ6 344 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 HP1BP3Q5SSJ5 553 aaPredicted RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 SEL1L2Q5TEA6 688 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 TAF2Q6P1X5 1199 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 JAMLQ86YT9 394 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 BEST2Q8NFU1 509 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 MGARPQ8TDB4 240 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 HSPH1Q92598 858 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 RBM18Q96H35 190 aaKnown RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 KCNK16Q96T55 309 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 SENP6Q9GZR1 1112 aaPredicted RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 PIDD1Q9HB75 910 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 MRPL47Q9HD33 250 aaKnown RBP6.36□□□□□ -1.39
SSBP1-213ENST00000496622 TMEM30AQ9NV96 361 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 GPATCH2LQ9NWQ4 482 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 SIRT5Q9NXA8 310 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 COX16Q9P0S2 106 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 SEPT3Q9UH03 358 aa6.36□□□□□ -1.39
SSBP1-213ENST00000496622 MIF4GDA9UHW6 222 aaKnown RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 AP3B1O00203 1094 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 B3GAT3O94766 335 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 SYF2O95926 243 aaKnown RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 GNALP38405 381 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 PBX3P40426 434 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 CACNA2D1P54289 1103 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 YWHAEP62258 255 aaKnown RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 PITX1P78337 314 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 SNCBQ16143 134 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 SCYL2Q6P3W7 929 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 ZNF600Q6ZNG1 722 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 FAM183BPQ6ZVS7 135 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 IFT20Q8IY31 132 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 SH2D3CQ8N5H7 860 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 KLHDC9Q8NEP7 349 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 MAGEC3Q8TD91 643 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 TMCO1Q9UM00 188 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 UBQLN1Q9UMX0 589 aaKnown RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 NR2E3Q9Y5X4 410 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 SPTBN5Q9NRC6 3674 aaKnown RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 LOC105371267A0A1B0GV96 52 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 MYBPHLA2RUH7 354 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 TRIM64A6NGJ6 449 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 TRIM64BA6NI03 449 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 CYB561D2O14569 222 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 PAPSS1O43252 624 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 RNGTTO60942 597 aaKnown RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 PIAS1O75925 651 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 FSBPO95073 299 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 CCDC166P0CW27 439 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 NCAM1P13591 858 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 P4HA1P13674 534 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 BMP8BP34820 402 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 RPL21P46778 160 aaKnown RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 BCAR1P56945 870 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 DSTNP60981 165 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 INCA1Q0VD86 236 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 GNA13Q14344 377 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 LPIN1Q14693 890 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 CNGA2Q16280 664 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 TRIM72Q6ZMU5 477 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms