RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 SMRP1Q8NCR6 262 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 BHMTQ93088 406 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 GUCD1Q96NT3 240 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 NOL6Q9H6R4 1146 aaKnown RBP16.13■□□□□ 0.17
PHF1-211ENST00000495509 CDH7Q9ULB5 785 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 WASH4PA8MWX3 477 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 RHOXF2BP0C7M4 288 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 RBP3P10745 1247 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 CHRNA3P32297 505 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 PTGIRP43119 386 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 NR2C2P49116 596 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 OASLQ15646 514 aaKnown RBP16.13■□□□□ 0.17
PHF1-211ENST00000495509 TPGS1Q6ZTW0 290 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 PRUNE1Q86TP1 453 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 DDX42Q86XP3 938 aaKnown RBP eCLIP16.13■□□□□ 0.17
PHF1-211ENST00000495509 CCDC105Q8IYK2 499 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 CELF5Q8N6W0 485 aaKnown RBP16.13■□□□□ 0.17
PHF1-211ENST00000495509 SMARCD2Q92925 531 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 NKD2Q969F2 451 aaPredicted RBP16.13■□□□□ 0.17
PHF1-211ENST00000495509 RIPOR3Q96MK2 946 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 RHOXF2Q9BQY4 288 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 TMEM121Q9BTD3 319 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 PRDM16Q9HAZ2 1276 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 HOMER3Q9NSC5 361 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 TMEM248Q9NWD8 314 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 GDE1Q9NZC3 331 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 ZNF148Q9UQR1 794 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 ZNF510Q9Y2H8 683 aa16.13■□□□□ 0.17
PHF1-211ENST00000495509 SHROOM3Q8TF72 1996 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 H7C0C1 242 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 TTI1O43156 1089 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 WEE1P30291 646 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 ATP5OP48047 213 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 NUMBP49757 651 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 NRLP54845 237 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 USP4Q13107 963 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 HABP4Q5JVS0 413 aaKnown RBP16.12■□□□□ 0.17
PHF1-211ENST00000495509 ARHGAP12Q8IWW6 846 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 DEFB123Q8N688 67 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 ATL2Q8NHH9 583 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 TMA16Q96EY4 203 aaKnown RBP16.12■□□□□ 0.17
PHF1-211ENST00000495509 OLFM3Q96PB7 478 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 LGMNQ99538 433 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 DDX50Q9BQ39 737 aaKnown RBP16.12■□□□□ 0.17
PHF1-211ENST00000495509 SLC39A8Q9C0K1 460 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 PCYOX1Q9UHG3 505 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 USP15Q9Y4E8 981 aaPredicted RBP16.12■□□□□ 0.17
PHF1-211ENST00000495509 WNT6Q9Y6F9 365 aa16.12■□□□□ 0.17
PHF1-211ENST00000495509 MCF2LO15068 1137 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 TBL1XO60907 577 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 FCARP24071 287 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 FNTAP49354 379 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 RABGAP1LQ5R372 815 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 TANGO2Q6ICL3 276 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 DRICH1Q6PGQ1 229 aaPredicted RBP16.11■□□□□ 0.17
PHF1-211ENST00000495509 DARS2Q6PI48 645 aaKnown RBP16.11■□□□□ 0.17
PHF1-211ENST00000495509 TDRD5Q8NAT2 981 aaKnown RBP16.11■□□□□ 0.17
PHF1-211ENST00000495509 GLIS1Q8NBF1 620 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 OR52K2Q8NGK3 314 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 DEPDC1BQ8WUY9 529 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 CCDC114Q96M63 670 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 PLK2Q9NYY3 685 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 DMGDHQ9UI17 866 aaKnown RBP16.11■□□□□ 0.17
PHF1-211ENST00000495509 CD207Q9UJ71 328 aa16.11■□□□□ 0.17
PHF1-211ENST00000495509 DRG1Q9Y295 367 aaKnown RBP16.11■□□□□ 0.17
PHF1-211ENST00000495509 ETS1P14921 441 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 TCF3P15923 654 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 KCNA5P22460 613 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 SP100P23497 879 aaPredicted RBP16.1■□□□□ 0.17
PHF1-211ENST00000495509 OR1E1P30953 314 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 GBP2P32456 591 aaPredicted RBP16.1■□□□□ 0.17
PHF1-211ENST00000495509 CHKAP35790 457 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 MTHFRP42898 656 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 GDF10P55107 478 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 DR1Q01658 176 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 SKIV2LQ15477 1246 aaKnown RBP16.1■□□□□ 0.17
PHF1-211ENST00000495509 C8orf74Q6P047 294 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 ARHGAP36Q6ZRI8 547 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 TMEM25Q86YD3 366 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 ADGRG2Q8IZP9 1017 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 CPXM2Q8N436 756 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 UBXN4Q92575 508 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 TRIM51Q9BSJ1 452 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 FRMD8P1Q9BZ68 369 aaPredicted RBP16.1■□□□□ 0.17
PHF1-211ENST00000495509 NYNRINQ9P2P1 1898 aaKnown RBP16.1■□□□□ 0.17
PHF1-211ENST00000495509 GRXCR2A6NFK2 248 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 ZSCAN5CA6NGD5 496 aaPredicted RBP16.1■□□□□ 0.17
PHF1-211ENST00000495509 HEPACAM2A8MVW5 462 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 DFFAO00273 331 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 ITGAVP06756 1048 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 LAMP2P13473 410 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 RBL1P28749 1068 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 SERPINB6P35237 376 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 CDH4P55283 916 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 TRIP13Q15645 432 aaPredicted RBP16.1■□□□□ 0.17
PHF1-211ENST00000495509 AFMIDQ63HM1 303 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 UMODL1-AS1Q8N2C9 162 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 FAM71DQ8N9W8 422 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 CCNYQ8ND76 341 aa16.1■□□□□ 0.17
PHF1-211ENST00000495509 CCDC26Q8TAB7 109 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms