RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	TRNP1	Q6NT89	227 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	MMS22L	Q6ZRQ5	1243 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	DGLUCY	Q7Z3D6	616 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	SYT12	Q8IV01	421 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	PRCC	Q92733	491 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	TCEAL3	Q969E4	200 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	MRGPRX3	Q96LB0	322 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	RPRD1A	Q96P16	312 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	TBCB	Q99426	244 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	TKTL2	Q9H0I9	626 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	ITM2C	Q9NQX7	267 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	METTL5	Q9NRN9	209 aa	Known RBP	13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	VANGL2	Q9ULK5	521 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	CACNA1E	Q15878	2313 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	TP53BP1	Q12888	1972 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327		A0A1B0GTH6	734 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327		A0A1W2PQC6	194 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	LNP1	A1A4G5	178 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	SYCE3	A1L190	88 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327		I6L893	689 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	TEX33	O43247	280 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	ENDOD1	O94919	500 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	ADCY5	O95622	1261 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	CCDC172	P0C7W6	258 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	FER	P16591	822 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	CD6	P30203	668 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	OXTR	P30559	389 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	RDX	P35241	583 aa	Known RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	NSF	P46459	744 aa	Known RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	TPMT	P51580	245 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	PLK1	P53350	603 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	ST8SIA6	P61647	398 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	ZBTB16	Q05516	673 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	ZNF33A	Q06730	810 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	CLEC16A	Q2KHT3	1053 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	FILIP1L	Q4L180	1135 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	CXorf57	Q6NSI4	855 aa	Known RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	ARMCX6	Q7L4S7	300 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	CIR1	Q86X95	450 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	PHF13	Q86YI8	300 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	SLC41A1	Q8IVJ1	513 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	ZNF366	Q8N895	744 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	PIGK	Q92643	395 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	IGSF8	Q969P0	613 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	PCDHB18P	Q96TA0	734 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	C11orf70	Q9BRQ4	267 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	EDEM2	Q9BV94	578 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	WDCP	Q9H6R7	721 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	PRSS16	Q9NQE7	514 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	ANLN	Q9NQW6	1124 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	RXFP3	Q9NSD7	469 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	WSB2	Q9NYS7	404 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	SUN2	Q9UH99	717 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	PILRB	Q9UKJ0	227 aa		13.75	□□□□□ -0.21
RBM28-208	ENST00000495327	GON4L	Q3T8J9	2241 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	FAM170A	A1A519	330 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	KHNYN	O15037	678 aa	Known RBP	13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	CLDN11	O75508	207 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	CALB1	P05937	261 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	ACADM	P11310	421 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	ITPKA	P23677	461 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	VASP	P50552	380 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	IRAK1	P51617	712 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	CDH4	P55283	916 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	ECT2L	Q008S8	904 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	SULT2A1	Q06520	285 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	NUMA1	Q14980	2115 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	MON1B	Q7L1V2	547 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	RABEPK	Q7Z6M1	372 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	ZNF683	Q8IZ20	524 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	APCDD1	Q8J025	514 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	C3orf20	Q8ND61	904 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	SLC30A5	Q8TAD4	765 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	BAP1	Q92560	729 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	FOXJ1	Q92949	421 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	TOE1	Q96GM8	510 aa	Known RBP	13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	C1orf74	Q96LT6	269 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	HSPA12B	Q96MM6	686 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	CFAP57	Q96MR6	1250 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	PPP1R9B	Q96SB3	815 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	TMEM74B	Q9NUR3	256 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	ERVW-1	Q9UQF0	538 aa		13.74	□□□□□ -0.21
RBM28-208	ENST00000495327	ATXN2	Q99700	1313 aa	Known RBP	13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	IGLV3-10	A0A075B6K4	115 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	TARSL2	A2RTX5	802 aa	Known RBP	13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	C2CD4B	A6NLJ0	364 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	PATE3	B3GLJ2	98 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	NDUFS2	O75306	463 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	PDGFRA	P16234	1089 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	SDC4	P31431	198 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	GGCX	P38435	758 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	CTSO	P43234	321 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	PTPN9	P43378	593 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	C1QBP	Q07021	282 aa	Known RBP	13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	STPG1	Q5TH74	334 aa		13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	RNF219	Q5W0B1	726 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	ZNF776	Q68DI1	518 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM28-208	ENST00000495327	SLC23A3	Q6PIS1	610 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms