RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 GLIS1Q8NBF1 620 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SEPT8Q92599 483 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 KREMEN1Q96MU8 473 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SLC29A1Q99808 456 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ATP13A3Q9H7F0 1226 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 MARCH7Q9H992 704 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 COPS7BQ9H9Q2 264 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 CNGB3Q9NQW8 809 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 LRP2BPQ9P2M1 347 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 COPG2Q9UBF2 871 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 DNPEPQ9ULA0 475 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 PCDHB12Q9Y5F1 795 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 TSPY2A6NKD2 308 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 C3orf70A6NLC5 250 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ENTPD3O75355 529 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 GARTP22102 1010 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SSTR1P30872 391 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 CSTF2P33240 577 aaKnown RBP eCLIP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 RFC4P35249 363 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF76P36508 570 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 MFAP3P55082 362 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 IFITM3Q01628 133 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 TAGLNQ01995 201 aaKnown RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 GCNT1Q02742 428 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ITGADQ13349 1161 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 CDK10Q15131 360 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ATP6AP1Q15904 470 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ASPRV1Q53RT3 343 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SLC10A5Q5PT55 438 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 HMBOX1Q6NT76 420 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 GALNT18Q6P9A2 607 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ERMP1Q7Z2K6 904 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 NGLY1Q96IV0 654 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SLC45A3Q96JT2 553 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 UIMC1Q96RL1 719 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 BTBD2Q9BX70 525 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 EMILIN2Q9BXX0 1053 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 KLHL25Q9H0H3 589 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 RAD21L1Q9H4I0 556 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 SYTL2Q9HCH5 934 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 UBA2Q9UBT2 640 aaPredicted RBP4.91□□□□□ -1.62
PRKD3-210ENST00000494667 CD300AQ9UGN4 299 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ANAPC7Q9UJX3 599 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 EMCNQ9ULC0 261 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 ZBTB1Q9Y2K1 713 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 AUP1Q9Y679 476 aa4.91□□□□□ -1.62
PRKD3-210ENST00000494667 POTEB3A0JP26 581 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 SAGE2PA6NJ88 616 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 UNCXA6NJT0 531 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 TAF4O00268 1085 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 NOL3O60936 208 aaKnown RBP4.9□□□□□ -1.62
PRKD3-210ENST00000494667 UGT2B11O75310 529 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 IL18RAPO95256 599 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 INHBAP08476 426 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 IL12AP29459 219 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 OPRL1P41146 370 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 GRM5P41594 1212 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 GRIA3P42263 894 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 CASP3P42574 277 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 PRKAA2P54646 552 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 MRPS22P82650 360 aaKnown RBP4.9□□□□□ -1.62
PRKD3-210ENST00000494667 MS4A2Q01362 244 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 RAD51Q06609 339 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 C1QBPQ07021 282 aaKnown RBP4.9□□□□□ -1.62
PRKD3-210ENST00000494667 FRG1Q14331 258 aaKnown RBP4.9□□□□□ -1.62
PRKD3-210ENST00000494667 MAPRE1Q15691 268 aaKnown RBP4.9□□□□□ -1.62
PRKD3-210ENST00000494667 WDR78Q5VTH9 848 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 STEAP4Q687X5 459 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 LMBRD2Q68DH5 695 aaPredicted RBP4.9□□□□□ -1.62
PRKD3-210ENST00000494667 XAF1Q6GPH4 301 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 RSBN1LQ6PCB5 846 aaPredicted RBP4.9□□□□□ -1.62
PRKD3-210ENST00000494667 POTEBQ6S5H4 581 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 ABRAXAS1Q6UWZ7 409 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 SLC16A12Q6ZSM3 486 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 TMEM26Q6ZUK4 368 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 C1orf186Q6ZWK4 172 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF720Q7Z2F6 126 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 HERC6Q8IVU3 1022 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 BEST2Q8NFU1 509 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 GRIN3AQ8TCU5 1115 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 FAM89AQ96GI7 184 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 FAM20AQ96MK3 541 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 TMEM121Q9BTD3 319 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 ZBTB3Q9H5J0 574 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 PLAC1Q9HBJ0 212 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 TM9SF3Q9HD45 589 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 TUFT1Q9NNX1 390 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 GMIPQ9P107 970 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 SERPINB13Q9UIV8 391 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 CNTN6Q9UQ52 1028 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 CDY2AQ9Y6F7 541 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 CDY1Q9Y6F8 540 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 MAU2Q9Y6X3 613 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 NRXN2Q9P2S2 1712 aa4.9□□□□□ -1.62
PRKD3-210ENST00000494667 CYP2D7A0A087X1C5 515 aa4.9□□□□□ -1.63
PRKD3-210ENST00000494667 ZBTB14O43829 449 aa4.9□□□□□ -1.63
PRKD3-210ENST00000494667 RASAL1O95294 804 aa4.9□□□□□ -1.63
PRKD3-210ENST00000494667 PRKCGP05129 697 aa4.9□□□□□ -1.63
PRKD3-210ENST00000494667 LDHBP07195 334 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms