RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 MED10Q9BTT4 135 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 ZNF518BQ9C0D4 1074 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 ELOVL4Q9GZR5 314 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 SDCBP2Q9H190 292 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 MMRN2Q9H8L6 949 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 C19orf73Q9NVV2 129 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 EHD2Q9NZN4 543 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 TRPM5Q9NZQ8 1165 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 CGGBP1Q9UFW8 167 aaPredicted RBP8.56□□□□□ -1.04
RIF1-211ENST00000494333 TMEM59LQ9UK28 342 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 PIEZO1Q92508 2521 aa8.56□□□□□ -1.04
RIF1-211ENST00000494333 TSC2P49815 1807 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 LOC100996750A0A140TA64 210 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
RIF1-211ENST00000494333 ASS1P00966 412 aaKnown RBP8.55□□□□□ -1.04
RIF1-211ENST00000494333 HLA-DRAP01903 254 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 TRIM49P0CI25 452 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 TRIM49CP0CI26 452 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 ARSAP15289 507 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 PIK3CAP42336 1068 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 PRCPP42785 496 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 CXCL12P48061 93 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 PPP3CCP48454 512 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 NDST1P52848 882 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 PPP3CAQ08209 521 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 TAF10Q12962 218 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 LRRC32Q14392 662 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 MTF1Q14872 753 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 EDRF1Q3B7T1 1238 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 DGKKQ5KSL6 1271 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 XP32Q5T750 250 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 PAQR9Q6ZVX9 377 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 NUP93Q8N1F7 819 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 CRYBG2Q8N1P7 616 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 ZBTB44Q8NCP5 570 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 ENGASEQ8NFI3 743 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 TAS1R2Q8TE23 839 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 SH3RF2Q8TEC5 729 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 ERCC4Q92889 916 aaPredicted RBP8.55□□□□□ -1.04
RIF1-211ENST00000494333 PPP1R14AQ96A00 147 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 SLITRK1Q96PX8 696 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 GSDMAQ96QA5 445 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 TTLL2Q9BWV7 592 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 SLC12A9Q9BXP2 914 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 KRTAP4-6Q9BYQ5 205 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 IMPG2Q9BZV3 1241 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 RNF38Q9H0F5 515 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 LINC00597Q9H2U6 94 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 HPS4Q9NQG7 708 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 TMEM30AQ9NV96 361 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 RMND1Q9NWS8 449 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 ZSCAN32Q9NX65 697 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 DUS2Q9NX74 493 aaKnown RBP8.55□□□□□ -1.04
RIF1-211ENST00000494333 GCNT4Q9P109 453 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 EBF1Q9UH73 591 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 CHORDC1Q9UHD1 332 aaPredicted RBP8.55□□□□□ -1.04
RIF1-211ENST00000494333 PCDHA5Q9Y5H7 936 aa8.55□□□□□ -1.04
RIF1-211ENST00000494333 ZNF840PA6NDX5 716 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 CETN3O15182 167 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 RTN3O95197 1032 aaPredicted RBP8.54□□□□□ -1.04
RIF1-211ENST00000494333 SMC2O95347 1197 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 ZGLP1P0C6A0 271 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 CCDC130P13994 396 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 YWHAQP27348 245 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 PDE6CP51160 858 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 GALK1P51570 392 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 CCR3P51677 355 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 HK2P52789 917 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 ZXDBP98169 803 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 AMPD2Q01433 879 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 SATB1Q01826 763 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 GRSF1Q12849 480 aaKnown RBP eCLIP8.54□□□□□ -1.04
RIF1-211ENST00000494333 SERINC3Q13530 473 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 PDGFRLQ15198 375 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 ZNF77Q15935 545 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 ZCWPW2Q504Y3 356 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 ZNF658Q5TYW1 1059 aaPredicted RBP8.54□□□□□ -1.04
RIF1-211ENST00000494333 KRT39Q6A163 491 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 ISM2Q6H9L7 571 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 Q6ZS52 159 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 UNC93AQ86WB7 457 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 FUKQ8N0W3 1084 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 SPEM1Q8N4L4 309 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 C12orf29Q8N999 325 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 CCDC150Q8NCX0 1101 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 BVESQ8NE79 360 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 SCAMP5Q8TAC9 235 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 OSCP1Q8WVF1 389 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 NELL1Q92832 810 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 SMARCE1Q969G3 411 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 TIGD1Q96MW7 591 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 IER2Q9BTL4 223 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 ECT2Q9H8V3 914 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 FBRSL1Q9HCM7 1045 aaKnown RBP8.54□□□□□ -1.04
RIF1-211ENST00000494333 TMEM8AQ9HCN3 771 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 DMAP1Q9NPF5 467 aaPredicted RBP8.54□□□□□ -1.04
RIF1-211ENST00000494333 PRMT8Q9NR22 394 aaPredicted RBP8.54□□□□□ -1.04
RIF1-211ENST00000494333 SIRPGQ9P1W8 387 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 HMGXB4Q9UGU5 601 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms