RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ZNF419Q96HQ0 510 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 CELF6Q96J87 481 aaKnown RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 SEC16BQ96JE7 1060 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 SMC6Q96SB8 1091 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 MLPHQ9BV36 600 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 VN1R3Q9BXE9 311 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 SYBUQ9NX95 663 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 MTRRQ9UBK8 725 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 ZNF180Q9UJW8 692 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 GGA2Q9UJY4 613 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 HS3ST4Q9Y661 456 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 ALPK3Q96L96 1907 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 IQANK1A0A1B0GTG1 560 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 WASH4PA8MWX3 477 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 NT5C1B-RDH14C9J2C7 533 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 E9PAM4 449 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 H7C4K7 107 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 RTN3O95197 1032 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 PARNO95453 639 aaKnown RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 IGLV3-27P01718 113 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 INHBAP08476 426 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ALADP13716 330 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 PGAM1P18669 254 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ATF6P18850 670 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 FOXN2P32314 431 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 NEK3P51956 506 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ARPP19P56211 112 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 TBX4P57082 545 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 COG7P83436 770 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ZNF33AQ06730 810 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 NIPAL4Q0D2K0 466 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 GPR17Q13304 367 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 TRIP4Q15650 581 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 SLC1A5Q15758 541 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ZKSCAN8Q15776 578 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 AFMIDQ63HM1 303 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 KCTD11Q693B1 232 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ITPRIPL1Q6GPH6 555 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 RWDD4Q6NW29 188 aaKnown RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 PRSS55Q6UWB4 352 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 C6orf89Q6UWU4 347 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 SLC39A5Q6ZMH5 540 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 RNF19BQ6ZMZ0 732 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ARHGAP36Q6ZRI8 547 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ANKS3Q6ZW76 656 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 MARK2Q7KZI7 788 aaKnown RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 C14orf80Q86SX3 495 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 MON1AQ86VX9 555 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 CACNA2D3Q8IZS8 1091 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ATPAF2Q8N5M1 289 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 PPM1NQ8N819 430 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 RTL3Q8N8U3 475 aaKnown RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ZSCAN18Q8TBC5 510 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 DIS3LQ8TF46 1054 aaKnown RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 C2orf15Q8WU43 125 aaKnown RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 ARNTL2Q8WYA1 636 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 APOPT1Q96IL0 206 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 SPATA17Q96L03 361 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 MAGEB18Q96M61 343 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 TSGA13Q96PP4 275 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 SEPT5Q99719 369 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 RNF208Q9H0X6 261 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 CWH43Q9H720 699 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 PRDM5Q9NQX1 630 aaPredicted RBP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.92□□□□□ -0.66
CLCN6-208ENST00000494028 CLIC5Q9NZA1 410 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 GRID1Q9ULK0 1009 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 TLR6Q9Y2C9 796 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 MAD1L1Q9Y6D9 718 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 FAM169AQ9Y6X4 670 aa10.92□□□□□ -0.66
CLCN6-208ENST00000494028 WDR27A2RRH5 827 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TCP11X1B4DZS4 312 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TRDMT1O14717 391 aaKnown RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 ZBTB24O43167 697 aaPredicted RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 ADAM12O43184 909 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 UGT1A9O60656 530 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 FAM155BO75949 473 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 VIMP08670 466 aaKnown RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TAC1P20366 129 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 CA4P22748 312 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 YWHAQP27348 245 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 RPA3P35244 121 aaPredicted RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SESN2P58004 480 aaPredicted RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 CRADDP78560 199 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SARNPP82979 210 aaKnown RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 IL9RQ01113 521 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TLE2Q04725 743 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SMARCB1Q12824 385 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 OLIG2Q13516 323 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SPARCL1Q14515 664 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 CRYMQ14894 314 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 MGAT5BQ3V5L5 792 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 GKAP1Q5VSY0 366 aaPredicted RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 CGB2Q6NT52 195 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 CNKSR3Q6P9H4 555 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 RGS9BPQ6ZS82 235 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 MICALCLQ6ZW33 695 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TAS1R1Q7RTX1 841 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms