RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 MIPP30301 263 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ADCY8P40145 1251 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 RGS2P41220 211 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 RPL34P49207 117 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 CPT1AP50416 773 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ZNF143P52747 638 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 VCPP55072 806 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 PPP2R2AP63151 447 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 IFI35P80217 286 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 SLC6A3Q01959 620 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 CAV1Q03135 178 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 TNK2Q07912 1038 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 CALCOCO2Q13137 446 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 AUHQ13825 339 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 BYSLQ13895 437 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 STILQ15468 1287 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 FSCN1Q16658 493 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 KYNUQ16719 465 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 SOWAHAQ2M3V2 549 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 GOLGA7BQ2TAP0 167 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 KRT71Q3SY84 523 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 TUBB8Q3ZCM7 444 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 CCDC14Q49A88 953 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 TFDP3Q5H9I0 405 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 KCNT1Q5JUK3 1230 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ZNF618Q5T7W0 954 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 FBXW10Q5XX13 1052 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 KAZNQ674X7 775 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ARHGAP17Q68EM7 881 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 OR6B2Q6IFH4 312 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 HIBCHQ6NVY1 386 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 CCDC81Q6ZN84 652 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 FAM183BPQ6ZVS7 135 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 TRMT10CQ7L0Y3 403 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 SPRED2Q7Z698 418 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 TMEM110Q86TL2 294 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 UNC93AQ86WB7 457 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 TTC30AQ86WT1 665 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 LRRC52Q8N7C0 313 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 FLCNQ8NFG4 579 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 BEST2Q8NFU1 509 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 UHMK1Q8TAS1 419 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 SLC35B2Q8TB61 432 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 KBTBD7Q8WVZ9 684 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 RXFP2Q8WXD0 754 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 NKD2Q969F2 451 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 RELTQ969Z4 430 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 PGM2Q96G03 612 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 C8orf48Q96LL4 319 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 HSPA12BQ96MM6 686 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 PEBP4Q96S96 227 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 SLC9A7Q96T83 725 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 TM9SF2Q99805 663 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 DDX23Q9BUQ8 820 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 KRTAP4-2Q9BYR5 136 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ROPN1BQ9BZX4 212 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 CENPHQ9H3R5 247 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 DPEP3Q9H4B8 488 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 NXF3Q9H4D5 531 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ZWILCHQ9H900 591 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ROPN1Q9HAT0 212 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 PAK6Q9NQU5 681 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 SEMA3GQ9NS98 782 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ASNSD1Q9NWL6 643 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 GDAP2Q9NXN4 497 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 ASIC3Q9UHC3 531 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 PCSK1NQ9UHG2 260 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 SLC12A6Q9UHW9 1150 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 FBXO9Q9UK97 447 aaPredicted RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 TSPAN16Q9UKR8 245 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 UBQLN1Q9UMX0 589 aaKnown RBP6.26□□□□□ -1.41
CPSF7-213ENST00000494016 SNX9Q9Y5X1 595 aa6.26□□□□□ -1.41
CPSF7-213ENST00000494016 LRRD1A4D1F6 860 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 GOLGA6L10A6NI86 522 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 SRRM3A6NNA2 597 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-213ENST00000494016 KPNA7A9QM74 516 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 E5RJQ4 531 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 DNALI1O14645 258 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-213ENST00000494016 PAPSS1O43252 624 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-213ENST00000494016 CST8O60676 142 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 KPNA6O60684 536 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 DUSP11O75319 330 aaKnown RBP6.25□□□□□ -1.41
CPSF7-213ENST00000494016 TCEA3O75764 348 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 TTC4O95801 387 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 GAS8O95995 478 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 CD4P01730 458 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 ITGAVP06756 1048 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 KRT7P08729 469 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 FAM163BP0C2L3 166 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 SETSIPP0DME0 302 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 ACRP10323 421 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 PDGFRAP16234 1089 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 ATF7P17544 494 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-213ENST00000494016 ATF4P18848 351 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-213ENST00000494016 GPD1P21695 349 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 BDNFP23560 247 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 LSP1P33241 339 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 PCK1P35558 622 aa6.25□□□□□ -1.41
CPSF7-213ENST00000494016 GNL1P36915 607 aaPredicted RBP6.25□□□□□ -1.41
CPSF7-213ENST00000494016 VPS41P49754 854 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 578.6 ms