RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 FRMD1Q8N878 549 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 ZNF366Q8N895 744 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 FAM172AQ8WUF8 416 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 CENPIQ92674 756 aaPredicted RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 SYN2Q92777 582 aaPredicted RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 TTC17Q96AE7 1141 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 VCPIP1Q96JH7 1222 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 KIAA1522Q9P206 1035 aaPredicted RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 LUC7L2Q9Y383 392 aaKnown RBP16.66■□□□□ 0.26
SATB1-217ENST00000493952 PI4KAP42356 2102 aa16.66■□□□□ 0.26
SATB1-217ENST00000493952 CCP110O43303 1012 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 CNTN5O94779 1100 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 ATP5BP06576 529 aaKnown RBP16.65■□□□□ 0.26
SATB1-217ENST00000493952 EPHX1P07099 455 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 PLEKP08567 350 aaPredicted RBP16.65■□□□□ 0.26
SATB1-217ENST00000493952 DLDP09622 509 aaKnown RBP16.65■□□□□ 0.26
SATB1-217ENST00000493952 GZMAP12544 262 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 BCKDHBP21953 392 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 NUMBP49757 651 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 HDAC4P56524 1084 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 NUMA1Q14980 2115 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 MAP7D1Q3KQU3 841 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 PLEKHG6Q3KR16 790 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 PLK5Q496M5 336 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 ARTNQ5T4W7 220 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 APCDD1Q8J025 514 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 OR52K2Q8NGK3 314 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 RLN3Q8WXF3 142 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 MYO19Q96H55 970 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 ZC3H10Q96K80 434 aaKnown RBP16.65■□□□□ 0.26
SATB1-217ENST00000493952 MRGPRX1Q96LB2 322 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 C1orf74Q96LT6 269 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 HAPLN3Q96S86 360 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 DUSP15Q9H1R2 295 aaPredicted RBP16.65■□□□□ 0.26
SATB1-217ENST00000493952 TMEM245Q9H330 911 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 GMEB2Q9UKD1 530 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 PLA2G4CQ9UP65 541 aa16.65■□□□□ 0.26
SATB1-217ENST00000493952 ADAMTS9Q9P2N4 1935 aa16.64■□□□□ 0.26
SATB1-217ENST00000493952 TP53BP1Q12888 1972 aaPredicted RBP16.64■□□□□ 0.25
SATB1-217ENST00000493952 E9PAM4 449 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 RTN2O75298 545 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 FTLP02792 175 aaPredicted RBP16.64■□□□□ 0.25
SATB1-217ENST00000493952 ASLP04424 464 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 MZF1P28698 734 aaPredicted RBP16.64■□□□□ 0.25
SATB1-217ENST00000493952 P2RY2P41231 377 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 CTSOP43234 321 aaPredicted RBP16.64■□□□□ 0.25
SATB1-217ENST00000493952 ZNF143P52747 638 aaPredicted RBP16.64■□□□□ 0.25
SATB1-217ENST00000493952 COPAP53621 1224 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 CDH4P55283 916 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 OGDHQ02218 1023 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 ALFQ53S48 1182 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 PLEKHA7Q6IQ23 1121 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 CCDC185Q8N715 623 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 MRGPRX3Q96LB0 322 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 MKRN2Q9H000 416 aaKnown RBP16.64■□□□□ 0.25
SATB1-217ENST00000493952 CD93Q9NPY3 652 aa16.64■□□□□ 0.25
SATB1-217ENST00000493952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.64■□□□□ 0.25
SATB1-217ENST00000493952 BZW2Q9Y6E2 419 aaKnown RBP16.64■□□□□ 0.25
SATB1-217ENST00000493952 IGLV3-10A0A075B6K4 115 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ANKRD62A6NC57 917 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 DRGXA6NNA5 263 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ZBTB24O43167 697 aaPredicted RBP16.63■□□□□ 0.25
SATB1-217ENST00000493952 SYNCRIPO60506 623 aaKnown RBP16.63■□□□□ 0.25
SATB1-217ENST00000493952 CLDN11O75508 207 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 MOCS3O95396 460 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 SERPING1P05155 500 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 RETP07949 1114 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ADRA1BP35368 520 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 MAMLD1Q13495 774 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 CAMK2GQ13555 558 aaPredicted RBP16.63■□□□□ 0.25
SATB1-217ENST00000493952 SLC12A1Q13621 1099 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ARL13BQ3SXY8 428 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ACBD5Q5T8D3 534 aaPredicted RBP16.63■□□□□ 0.25
SATB1-217ENST00000493952 SPECC1LQ69YQ0 1117 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 DCUN1D2Q6PH85 259 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 LRRC31Q6UY01 552 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 CACUL1Q86Y37 369 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 VSTM4Q8IW00 320 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ALG14Q96F25 216 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 SPACA7Q96KW9 195 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 MTG2Q9H4K7 406 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 PRDM16Q9HAZ2 1276 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 PARVAQ9NVD7 372 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 MPP6Q9NZW5 540 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ARHGAP20Q9P2F6 1191 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ADAMTS1Q9UHI8 967 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 MBD1Q9UIS9 605 aaPredicted RBP16.63■□□□□ 0.25
SATB1-217ENST00000493952 ERVW-1Q9UQF0 538 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 TBC1D30Q9Y2I9 924 aa16.63■□□□□ 0.25
SATB1-217ENST00000493952 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.62■□□□□ 0.25
SATB1-217ENST00000493952 SRGAP2O75044 1071 aa16.62■□□□□ 0.25
SATB1-217ENST00000493952 EPN2O95208 641 aa16.62■□□□□ 0.25
SATB1-217ENST00000493952 PLK1P53350 603 aa16.62■□□□□ 0.25
SATB1-217ENST00000493952 SPEM2Q0P670 501 aa16.62■□□□□ 0.25
SATB1-217ENST00000493952 ZNF177Q13360 481 aaPredicted RBP16.62■□□□□ 0.25
SATB1-217ENST00000493952 ELF2Q15723 593 aa16.62■□□□□ 0.25
SATB1-217ENST00000493952 PMS2CLQ68D20 193 aa16.62■□□□□ 0.25
SATB1-217ENST00000493952 KIAA1324Q6UXG2 1013 aaKnown RBP16.62■□□□□ 0.25
SATB1-217ENST00000493952 C11orf74Q86VG3 221 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms