RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 MAPK8P45983 427 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 BCAT1P54687 386 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 ZNF33AQ06730 810 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 BST2Q10589 180 aaKnown RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 ZNF211Q13398 564 aaPredicted RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 CUL2Q13617 745 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 DUOXA1Q1HG43 343 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 GOLGA7BQ2TAP0 167 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 CBWD6Q4V339 395 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 CBWD3Q5JTY5 395 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 CBWD5Q5RIA9 395 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 ARHGAP17Q68EM7 881 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 ANKRD40Q6AI12 368 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 ISM2Q6H9L7 571 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 KIAA1324Q6UXG2 1013 aaKnown RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 TOGARAM2Q6ZUX3 1019 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 HDDC3Q8N4P3 179 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 DDI1Q8WTU0 396 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 GOLGA1Q92805 767 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 TIGD1Q96MW7 591 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 ACOX2Q99424 681 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 GTPBP2Q9BX10 602 aaKnown RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 CIPCQ9C0C6 399 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 AKTIPQ9H8T0 292 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 EVLQ9UI08 416 aaPredicted RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 MBD1Q9UIS9 605 aaPredicted RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 SALL4Q9UJQ4 1053 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 TSPAN16Q9UKR8 245 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 AGO1Q9UL18 857 aaKnown RBP7.88□□□□□ -1.15
RBM39-238ENST00000493853 CYP8B1Q9UNU6 501 aa7.88□□□□□ -1.15
RBM39-238ENST00000493853 A0A1W2PQF6 199 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 BICDL2A1A5D9 508 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 WASH3PC4AMC7 463 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 TIMM44O43615 452 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 TSPAN3O60637 253 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ALX3O95076 343 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 KLKB1P03952 638 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 SYPP08247 313 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 H2AFB2P0C5Z0 115 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 CISD3P0C7P0 127 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 SETSIPP0DME0 302 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 CEACAM1P13688 526 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 LCP1P13796 627 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 GNSP15586 552 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ENGP17813 658 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 HOXD12P35452 270 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ZNF132P52740 706 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ADIGQ0VDE8 80 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ST3GAL2Q16842 350 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 MPPE1Q53F39 396 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 COBLL1Q53SF7 1204 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 RAB41Q5JT25 222 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 WDR45BQ5MNZ6 344 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 KLHL10Q6JEL2 608 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 SLC23A3Q6PIS1 610 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 TMEM270Q6UE05 265 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ANKS1BQ7Z6G8 1248 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 FMNL3Q8IVF7 1028 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 PPM1KQ8N3J5 372 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 UBA3Q8TBC4 463 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ERCC4Q92889 916 aaPredicted RBP7.87□□□□□ -1.15
RBM39-238ENST00000493853 TMA16Q96EY4 203 aaKnown RBP7.87□□□□□ -1.15
RBM39-238ENST00000493853 DHTKD1Q96HY7 919 aaPredicted RBP7.87□□□□□ -1.15
RBM39-238ENST00000493853 NT5C1BQ96P26 610 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 GABRG3Q99928 467 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 SLC2A11Q9BYW1 496 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ULBP1Q9BZM6 244 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 PRDM16Q9HAZ2 1276 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ABCC13Q9NSE7 274 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 TMEM74BQ9NUR3 256 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ELOVL2Q9NXB9 296 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 FBXO10Q9UK96 956 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 PILRBQ9UKJ0 227 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 PLA2G4CQ9UP65 541 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 COQ4Q9Y3A0 265 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 PCDHB4Q9Y5E5 795 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 RAD54BQ9Y620 910 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 STON1Q9Y6Q2 735 aa7.87□□□□□ -1.15
RBM39-238ENST00000493853 ATXN2Q99700 1313 aaKnown RBP7.86□□□□□ -1.15
RBM39-238ENST00000493853 IGHV1OR15-9A0A0B4J2B8 117 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 TRIM49BA6NDI0 452 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 MEI4A8MW99 385 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 CDX4O14627 284 aaPredicted RBP7.86□□□□□ -1.15
RBM39-238ENST00000493853 GIPC1O14908 333 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 OPHN1O60890 802 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 PENKP01210 267 aaPredicted RBP7.86□□□□□ -1.15
RBM39-238ENST00000493853 EPHX1P07099 455 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 SERPINF2P08697 491 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 PAEPP09466 180 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 CSRP1P21291 193 aaKnown RBP7.86□□□□□ -1.15
RBM39-238ENST00000493853 PMLP29590 882 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 CD6P30203 668 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 OXTRP30559 389 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 FMO5P49326 533 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 PMS1P54277 932 aaKnown RBP7.86□□□□□ -1.15
RBM39-238ENST00000493853 MFAP3P55082 362 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 ZNF445P59923 1031 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 ZNF252P-AS1Q0IIN9 211 aa7.86□□□□□ -1.15
RBM39-238ENST00000493853 STILQ15468 1287 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms