RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 ADAMTS1Q9UHI8 967 aa12.78□□□□□ -0.36
SAMM50-205ENST00000493621 FZD4Q9ULV1 537 aa12.78□□□□□ -0.36
SAMM50-205ENST00000493621 CEP83Q9Y592 693 aa12.78□□□□□ -0.36
SAMM50-205ENST00000493621 PCDHB4Q9Y5E5 795 aa12.78□□□□□ -0.36
SAMM50-205ENST00000493621 PCDHGA1Q9Y5H4 931 aa12.78□□□□□ -0.36
SAMM50-205ENST00000493621 EDDM13A0A1B0GTR0 161 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 A0A1W2PR77 199 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 TARSL2A2RTX5 802 aaKnown RBP12.77□□□□□ -0.37
SAMM50-205ENST00000493621 MOCS2O96007 188 aaPredicted RBP12.77□□□□□ -0.37
SAMM50-205ENST00000493621 CALCAP01258 141 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 SRPRAP08240 638 aaKnown RBP12.77□□□□□ -0.37
SAMM50-205ENST00000493621 PAEPP09466 180 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 BRD2P25440 801 aaKnown RBP12.77□□□□□ -0.37
SAMM50-205ENST00000493621 ITPKBP27987 946 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 CCR5P51681 352 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 SEMG2Q02383 582 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 ARID5BQ14865 1188 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 DCAF6Q58WW2 860 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 MS4A13Q5J8X5 152 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 C6orf118Q5T5N4 469 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 AADATQ8N5Z0 425 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 KDM1BQ8NB78 822 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 OR14C36Q8NHC7 312 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 ADAM32Q8TC27 787 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 DQX1Q8TE96 717 aaKnown RBP12.77□□□□□ -0.37
SAMM50-205ENST00000493621 SERAC1Q96JX3 654 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 FCRL2Q96LA5 508 aaPredicted RBP12.77□□□□□ -0.37
SAMM50-205ENST00000493621 FAM129BQ96TA1 746 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 ZSWIM1Q9BR11 485 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 GDF3Q9NR23 364 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 AK5Q9Y6K8 562 aa12.77□□□□□ -0.37
SAMM50-205ENST00000493621 SETXQ7Z333 2677 aaKnown RBP12.77□□□□□ -0.37
SAMM50-205ENST00000493621 HELZ2Q9BYK8 2649 aaKnown RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ARID1BQ8NFD5 2236 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 A0A1W2PQ27 194 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 A0A1W2PQ64 194 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 RNF225M0QZC1 329 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 YKT6O15498 198 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 FBXO21O94952 628 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 LUC7L3O95232 432 aaKnown RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 MOCS3O95396 460 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 FYNP06241 537 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 C1SP09871 688 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 GOT1P17174 413 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 EPHA8P29322 1005 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ARRB1P49407 418 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ACADVLP49748 655 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 NUMBP49757 651 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ADPRHP54922 357 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 FKBP3Q00688 224 aaKnown RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ECT2LQ008S8 904 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 BNIP3Q12983 259 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 TARDBPQ13148 414 aaKnown RBP eCLIP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 PNOCQ13519 176 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 CNGA2Q16280 664 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 SLC45A4Q5BKX6 768 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 RNF219Q5W0B1 726 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 SND1Q7KZF4 910 aaKnown RBP eCLIP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 APCDD1Q8J025 514 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 LGI2Q8N0V4 545 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 STK40Q8N2I9 435 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 SLC35C1Q96A29 364 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 RPL10LQ96L21 214 aaKnown RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 HSFY1Q96LI6 401 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 SERPINB11Q96P15 392 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 UBL7Q96S82 380 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ARMCX3Q9UH62 379 aaPredicted RBP12.76□□□□□ -0.37
SAMM50-205ENST00000493621 NAALADL1Q9UQQ1 740 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 TLR6Q9Y2C9 796 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ZDHHC9Q9Y397 364 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 ITIH6Q6UXX5 1313 aa12.76□□□□□ -0.37
SAMM50-205ENST00000493621 KALRNO60229 2985 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3DA0A087WVF3 549 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3IA0A087WXS9 549 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3EA0A087X179 549 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3KA0A087X1G2 549 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TRIM49BA6NDI0 452 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3FA6NER0 549 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-205ENST00000493621 C10orf142B7Z368 130 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3LB9A6J9 549 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TLR4O00206 839 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TLX3O43711 291 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-205ENST00000493621 ZIC2O95409 532 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-205ENST00000493621 ADH1BP00325 375 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 IL1BP01584 269 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 PRB1P04280 392 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 TBC1D3HP0C7X1 549 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 CDK4P11802 303 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 C5AR1P21730 350 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 EIF2S3P41091 472 aaKnown RBP12.75□□□□□ -0.37
SAMM50-205ENST00000493621 FMO5P49326 533 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 STK19P49842 368 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-205ENST00000493621 NXPH1P58417 271 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 PPP2CBP62714 309 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 PPP2CAP67775 309 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 STILQ15468 1287 aa12.75□□□□□ -0.37
SAMM50-205ENST00000493621 HES3Q5TGS1 186 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms