RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SART1O43290 800 aaKnown RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 AP5Z1O43299 807 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 THAP12O43422 761 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 HYAL3O43820 417 aaPredicted RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 TLR5O60602 858 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 IGLV3-25P01717 112 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 IGLV3-27P01718 113 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 CAPNS1P04632 268 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 RETP07949 1114 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 PNMA6AP0CW24 399 aaPredicted RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 GZMAP12544 262 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 RARGP13631 454 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 FERP16591 822 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 MMP8P22894 467 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 ATP5C1P36542 298 aaKnown RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 SNX16P57768 344 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 YWHAGP61981 247 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS52-219ENST00000493379 NOMO3P69849 1222 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 ZBED6P86452 979 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 CTBSQ01459 385 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 PFKPQ01813 784 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 PRKCQQ04759 706 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 PTP4A2Q12974 167 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 TBX2Q13207 712 aaPredicted RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 PDCLQ13371 301 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 BSPRYQ5W0U4 402 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 HGSNATQ68CP4 663 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 LAIR1Q6GTX8 287 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 TRIM72Q6ZMU5 477 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 Q6ZNB5 142 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 BNIPLQ7Z465 357 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 TADA2BQ86TJ2 420 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 DDX42Q86XP3 938 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS52-219ENST00000493379 FAM217AQ8IXS0 508 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 ZNF843Q8N446 348 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 TMEM35BQ8NCS4 154 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 SLC30A5Q8TAD4 765 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 OSCP1Q8WVF1 389 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 IRF7Q92985 503 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 AZIN2Q96A70 460 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 MSANTD3Q96H12 275 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 VCPIP1Q96JH7 1222 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 PPP1R13BQ96KQ4 1090 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 SPAG5Q96R06 1193 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 CPXM1Q96SM3 734 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 PCDHB18PQ96TA0 734 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 OSBPL6Q9BZF3 934 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 IRX2Q9BZI1 471 aaPredicted RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 ULBP1Q9BZM6 244 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 XPO4Q9C0E2 1151 aaKnown RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 MIS12Q9H081 205 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 RBSNQ9H1K0 784 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 LRRC4Q9HBW1 653 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 NLRC4Q9NPP4 1024 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 ABCC13Q9NSE7 274 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 OLA1Q9NTK5 396 aaKnown RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 IFNKQ9P0W0 207 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 KLK13Q9UKR3 277 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 FBXO4Q9UKT5 387 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 CCL26Q9Y258 94 aa7.03□□□□□ -1.28
VPS52-219ENST00000493379 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.03□□□□□ -1.287e-8■■■■□ 21.6
VPS52-219ENST00000493379 BZW2Q9Y6E2 419 aaKnown RBP7.03□□□□□ -1.28
VPS52-219ENST00000493379 DENND4CQ5VZ89 1909 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 E5RJQ4 531 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 LEFTY2O00292 366 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 CBFA2T2O43439 604 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 GFPT2O94808 682 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 ENDOD1O94919 500 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 CLSTN1O94985 981 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 LATS1O95835 1130 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 TBX18O95935 607 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 LTFP02788 710 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 GYPCP04921 128 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 TPM3P06753 285 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 MMEP08473 750 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 RALAP11233 206 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 SNRPBP14678 240 aaKnown RBP7.02□□□□□ -1.29
VPS52-219ENST00000493379 USP8P40818 1118 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 GRIA4P48058 902 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 YWHAZP63104 245 aaKnown RBP7.02□□□□□ -1.29
VPS52-219ENST00000493379 GPLD1P80108 840 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 COG7P83436 770 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 CDK17Q00537 523 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 SLC6A3Q01959 620 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 ADIGQ0VDE8 80 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 FZD5Q13467 585 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 TRIM14Q14142 442 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 PDGFRLQ15198 375 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 ASTE1Q2TB18 679 aaPredicted RBP7.02□□□□□ -1.29
VPS52-219ENST00000493379 PTPN20Q4JDL3 420 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 SLC44A4Q53GD3 710 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 EFHC1Q5JVL4 640 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 STPG1Q5TH74 334 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 E4F1Q66K89 784 aaPredicted RBP7.02□□□□□ -1.29
VPS52-219ENST00000493379 RNF43Q68DV7 783 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 SPECC1LQ69YQ0 1117 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 PPP1R2P3Q6NXS1 205 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 C1orf228Q6PIY5 440 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 OLFML1Q6UWY5 402 aa7.02□□□□□ -1.29
VPS52-219ENST00000493379 SLC26A9Q7LBE3 791 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms