RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 EPHA8P29322 1005 aaPredicted RBP22.24■■□□□ 1.15
PFDN4-205ENST00000493356 SEMG2Q02383 582 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 TARDBPQ13148 414 aaKnown RBP eCLIP22.24■■□□□ 1.15
PFDN4-205ENST00000493356 FSCBQ5H9T9 825 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 PITRM1Q5JRX3 1037 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 KRBA2Q6ZNG9 492 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 MMS22LQ6ZRQ5 1243 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 CARNMT1Q8N4J0 409 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 AADATQ8N5Z0 425 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 CLEC4CQ8WTT0 213 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 TFAP2BQ92481 460 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 TSC1Q92574 1164 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 ERVW-1Q9UQF0 538 aa22.24■■□□□ 1.15
PFDN4-205ENST00000493356 ZIC2O95409 532 aaPredicted RBP22.23■■□□□ 1.15
PFDN4-205ENST00000493356 CTSOP43234 321 aaPredicted RBP22.23■■□□□ 1.15
PFDN4-205ENST00000493356 ARRB1P49407 418 aaPredicted RBP22.23■■□□□ 1.15
PFDN4-205ENST00000493356 CDH18Q13634 790 aa22.23■■□□□ 1.15
PFDN4-205ENST00000493356 HES3Q5TGS1 186 aa22.23■■□□□ 1.15
PFDN4-205ENST00000493356 FBXL19Q6PCT2 694 aa22.23■■□□□ 1.15
PFDN4-205ENST00000493356 FCRL2Q96LA5 508 aaPredicted RBP22.23■■□□□ 1.15
PFDN4-205ENST00000493356 FAM129BQ96TA1 746 aa22.23■■□□□ 1.15
PFDN4-205ENST00000493356 DDX50Q9BQ39 737 aaKnown RBP22.23■■□□□ 1.15
PFDN4-205ENST00000493356 PRORYQ9H606 182 aa22.23■■□□□ 1.15
PFDN4-205ENST00000493356 AK5Q9Y6K8 562 aa22.23■■□□□ 1.15
PFDN4-205ENST00000493356 ITIH6Q6UXX5 1313 aa22.23■■□□□ 1.15
PFDN4-205ENST00000493356 EDDM13A0A1B0GTR0 161 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 SRPRAP08240 638 aaKnown RBP22.22■■□□□ 1.15
PFDN4-205ENST00000493356 TBXAS1P24557 533 aaPredicted RBP22.22■■□□□ 1.15
PFDN4-205ENST00000493356 PSMD8P48556 350 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 ADPRHP54922 357 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 NXPH1P58417 271 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 C19orf57Q0VDD7 668 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 LRMPQ12912 555 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 RTP5Q14D33 572 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 MS4A13Q5J8X5 152 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 LRRC69Q6ZNQ3 347 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 SND1Q7KZF4 910 aaKnown RBP eCLIP22.22■■□□□ 1.15
PFDN4-205ENST00000493356 HSCBQ8IWL3 235 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 CFAP52Q8N1V2 620 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 SLC39A7Q92504 469 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 SERAC1Q96JX3 654 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 ZSWIM1Q9BR11 485 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 NRSN2Q9GZP1 204 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 NUCKS1Q9H1E3 243 aaKnown RBP22.22■■□□□ 1.15
PFDN4-205ENST00000493356 SLCO3A1Q9UIG8 710 aa22.22■■□□□ 1.15
PFDN4-205ENST00000493356 TK2O00142 265 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 TLR4O00206 839 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 SLC16A3O15427 465 aaKnown RBP22.21■■□□□ 1.15
PFDN4-205ENST00000493356 C1QL1O75973 258 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 LUC7L3O95232 432 aaKnown RBP22.21■■□□□ 1.15
PFDN4-205ENST00000493356 FYNP06241 537 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 PAEPP09466 180 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 GOT1P17174 413 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 BNIP3Q12983 259 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 SFMBT2Q5VUG0 894 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 TMEM270Q6UE05 265 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 CCDC117Q8IWD4 279 aaPredicted RBP22.21■■□□□ 1.15
PFDN4-205ENST00000493356 OR14C36Q8NHC7 312 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 DQX1Q8TE96 717 aaKnown RBP22.21■■□□□ 1.15
PFDN4-205ENST00000493356 TPX2Q9ULW0 747 aaKnown RBP22.21■■□□□ 1.15
PFDN4-205ENST00000493356 RAI2Q9Y5P3 530 aa22.21■■□□□ 1.15
PFDN4-205ENST00000493356 M0QYV0 167 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 ATXN7O15265 892 aaPredicted RBP22.2■■□□□ 1.14
PFDN4-205ENST00000493356 LATO43561 262 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 ADH1BP00325 375 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 C5AR1P21730 350 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 RXRGP48443 463 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 KRT85P78386 507 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 ECT2LQ008S8 904 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 CNGA2Q16280 664 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 DCAF6Q58WW2 860 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 SLC45A4Q5BKX6 768 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 STK40Q8N2I9 435 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 PTPRN2Q92932 1015 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 SLC35C1Q96A29 364 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 SLC39A13Q96H72 371 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 HSFY1Q96LI6 401 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 SERPINB11Q96P15 392 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 GOLPH3LQ9H4A5 285 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 ERVMER34-1Q9H9K5 563 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 TLR6Q9Y2C9 796 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 CEP83Q9Y592 693 aa22.2■■□□□ 1.14
PFDN4-205ENST00000493356 RRP8O43159 456 aaKnown RBP22.19■■□□□ 1.14
PFDN4-205ENST00000493356 FBXO21O94952 628 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 MOCS3O95396 460 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 PPP2CBP62714 309 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 PPP2CAP67775 309 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 ILKQ13418 452 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 NNTQ13423 1086 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 RNF219Q5W0B1 726 aaPredicted RBP22.19■■□□□ 1.14
PFDN4-205ENST00000493356 KANSL1Q7Z3B3 1105 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 APCDD1Q8J025 514 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 OXR1Q8N573 874 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 SNIP1Q8TAD8 396 aaKnown RBP22.19■■□□□ 1.14
PFDN4-205ENST00000493356 RPL10LQ96L21 214 aaKnown RBP22.19■■□□□ 1.14
PFDN4-205ENST00000493356 MIS12Q9H081 205 aa22.19■■□□□ 1.14
PFDN4-205ENST00000493356 TBC1D3DA0A087WVF3 549 aa22.18■■□□□ 1.14
PFDN4-205ENST00000493356 TBC1D3IA0A087WXS9 549 aa22.18■■□□□ 1.14
PFDN4-205ENST00000493356 TBC1D3EA0A087X179 549 aa22.18■■□□□ 1.14
PFDN4-205ENST00000493356 TBC1D3KA0A087X1G2 549 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms