RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 BYSLQ13895 437 aaKnown RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 IRF3Q14653 427 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 PUM1Q14671 1186 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ASIC2Q16515 512 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 GPR162Q16538 588 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 SPDYE7PQ495Y7 208 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CDC73Q6P1J9 531 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 TMEM154Q6P9G4 183 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CRELD2Q6UXH1 353 aaPredicted RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ATG14Q6ZNE5 492 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 LRRC55Q6ZSA7 311 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CHST9Q7L1S5 443 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 DTX2Q86UW9 622 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 IQCA1Q86XH1 822 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 TMPRSS6Q8IU80 811 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ADGRF2Q8IZF7 708 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ANKRD35Q8N283 1001 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 TOR1AIP2Q8NFQ8 470 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 DESI2Q9BSY9 194 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 APOL6Q9BWW8 343 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 RABEP2Q9H5N1 569 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CDCP1Q9H5V8 836 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 TAB2Q9NYJ8 693 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 SLC25A13Q9UJS0 675 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CCNL1Q9UK58 526 aaPredicted RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 MKLN1Q9UL63 735 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 FPGT-TNNI3KV9GXZ4 949 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CYP3A7-CYP3A51PA0A087WV96 503 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CAPN14A8MX76 684 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 GOLGA6L6A8MZA4 724 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 MUSKO15146 869 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ADAM20O43506 726 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ENTPD3O75355 529 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 SCAF4O95104 1147 aaKnown RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 RHOP08100 348 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 TMIGD3P0DMS9 266 aaPredicted RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 JUNBP17275 347 aaPredicted RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CYP3A7P24462 503 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 RPS6KA3P51812 740 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 SUMO2P61956 95 aaKnown RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 OLR1P78380 273 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ZNF385BQ569K4 471 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 GKAP1Q5VSY0 366 aaPredicted RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 MAMDC4Q6UXC1 1216 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 OR52L2PQ8NGH6 319 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 POMGNT1Q8WZA1 660 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 CTHRC1Q96CG8 243 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 PRR25Q96S07 402 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 ALOXE3Q9BYJ1 711 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 USP29Q9HBJ7 922 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 MORF4L1Q9UBU8 362 aa4.99□□□□□ -1.61
VPS13A-212ENST00000493341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.99□□□□□ -1.61
VPS13A-212ENST00000493341 BICDL2A1A5D9 508 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 BTBD18B2RXH4 712 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 CES2O00748 559 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 BCAT2O15382 392 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-212ENST00000493341 KAT7O95251 611 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 SAT1P21673 171 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 PRPH2P23942 346 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 PPP5CP53041 499 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 PDE1AP54750 535 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 SCARB2Q14108 478 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 IL13RA2Q14627 380 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 CCDC92Q53HC0 331 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-212ENST00000493341 LRCH2Q5VUJ6 765 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 GARNL3Q5VVW2 1013 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 SP5Q6BEB4 398 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-212ENST00000493341 MTFR2Q6P444 385 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 TMEM81Q6P7N7 255 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 ZSCAN30Q86W11 494 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 CEP97Q8IW35 865 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 SCN4BQ8IWT1 228 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 FUKQ8N0W3 1084 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 LGI4Q8N135 537 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 BEND2Q8NDZ0 799 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 CADM4Q8NFZ8 388 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 RAB40AQ8WXH6 277 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 NPAS1Q99742 590 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 CINPQ9BW66 212 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-212ENST00000493341 NPLQ9BXD5 320 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-212ENST00000493341 KLHL4Q9C0H6 718 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 MEGF9Q9H1U4 602 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 RETREG1Q9H6L5 497 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 SUCLA2Q9P2R7 463 aaPredicted RBP4.98□□□□□ -1.61
VPS13A-212ENST00000493341 HDAC6Q9UBN7 1215 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 CHST2Q9Y4C5 530 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 SNX5Q9Y5X3 404 aa4.98□□□□□ -1.61
VPS13A-212ENST00000493341 SCO2A0A1W2PP80 73 aa4.97□□□□□ -1.61
VPS13A-212ENST00000493341 A0A1W2PQM1 296 aa4.97□□□□□ -1.61
VPS13A-212ENST00000493341 FRMD3A2A2Y4 597 aa4.97□□□□□ -1.61
VPS13A-212ENST00000493341 TCAF2A6NFQ2 919 aa4.97□□□□□ -1.61
VPS13A-212ENST00000493341 EIF3CLB5ME19 914 aaKnown RBP4.97□□□□□ -1.61
VPS13A-212ENST00000493341 SLC16A3O15427 465 aaKnown RBP4.97□□□□□ -1.61
VPS13A-212ENST00000493341 CCNT1O60563 726 aaKnown RBP4.97□□□□□ -1.61
VPS13A-212ENST00000493341 TACC1O75410 805 aa4.97□□□□□ -1.61
VPS13A-212ENST00000493341 IL6RP08887 468 aaPredicted RBP4.97□□□□□ -1.61
VPS13A-212ENST00000493341 CPOXP36551 454 aa4.97□□□□□ -1.61
VPS13A-212ENST00000493341 LMAN1P49257 510 aa4.97□□□□□ -1.61
VPS13A-212ENST00000493341 SLURP1P55000 103 aa4.97□□□□□ -1.61
VPS13A-212ENST00000493341 PRAMEP78395 509 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 980.8 ms