RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 DDIT4Q9NX09 232 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 CYTH4Q9UIA0 394 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 INTS6Q9UL03 887 aaKnown RBP12.87□□□□□ -0.35
COL6A1-205ENST00000492851 EPG5Q9HCE0 2579 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 KMT2BQ9UMN6 2715 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-205ENST00000492851 ITIH6Q6UXX5 1313 aa12.87□□□□□ -0.35
COL6A1-205ENST00000492851 A0A1B0GVM2 712 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 TCAF2A6NFQ2 919 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 BECN2A8MW95 431 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 C1QTNF9BB2RNN3 333 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 HYAL3O43820 417 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 SIN3BO75182 1162 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 FSBPO95073 299 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ADH1BP00325 375 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 F9P00740 461 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 C1QTNF9P0C862 333 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 C5AR1P21730 350 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 SLC8A1P32418 973 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 NOS2P35228 1153 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 RACK1P63244 317 aaKnown RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 SLC6A3Q01959 620 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ELAVL3Q14576 367 aaKnown RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 VWA3BQ502W6 1294 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 FSCBQ5H9T9 825 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 KIAA0895LQ68EN5 471 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 OR6B2Q6IFH4 312 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 SND1Q7KZF4 910 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 RAB44Q7Z6P3 723 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ADAT2Q7Z6V5 191 aaKnown RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 DSG4Q86SJ6 1040 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 IRF2BP1Q8IU81 584 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 DHX40Q8IX18 779 aaKnown RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 DEFB106AQ8N104 65 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 WDTC1Q8N5D0 677 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 TMEM35BQ8NCS4 154 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ZNF397Q8NF99 534 aaPredicted RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ADAMTS14Q8WXS8 1223 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 IGSF8Q969P0 613 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 MYO19Q96H55 970 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 NDST4Q9H3R1 872 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ACP6Q9NPH0 428 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ADAMTS1Q9UHI8 967 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 DNAJC12Q9UKB3 198 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 PCOLCE2Q9UKZ9 415 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ANKRD6Q9Y2G4 727 aa12.86□□□□□ -0.35
COL6A1-205ENST00000492851 CNOT1A5YKK6 2376 aaKnown RBP12.86□□□□□ -0.35
COL6A1-205ENST00000492851 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-205ENST00000492851 A0A1B0GVT2 93 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 CLDN11O75508 207 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 RNASEH2AO75792 299 aaKnown RBP12.85□□□□□ -0.35
COL6A1-205ENST00000492851 GOT1P17174 413 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 SPINK2P20155 84 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 GALCP54803 685 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 C21orf59P57076 290 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 ZNF177Q13360 481 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-205ENST00000492851 TAF5Q15542 800 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 KIF19Q2TAC6 998 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 INAVAQ3KP66 663 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 FAM46CQ5VWP2 391 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 GJB7Q6PEY0 223 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 SLC26A9Q7LBE3 791 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 MMAAQ8IVH4 418 aaKnown RBP12.85□□□□□ -0.35
COL6A1-205ENST00000492851 CCAR2Q8N163 923 aaKnown RBP12.85□□□□□ -0.35
COL6A1-205ENST00000492851 MSANTD4Q8NCY6 345 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 OR2T34Q8NGX1 318 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 RHBDD1Q8TEB9 315 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 GATA6Q92908 595 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 RPRD1AQ96P16 312 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-205ENST00000492851 SPAG5Q96R06 1193 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 CPXM1Q96SM3 734 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 PRMT1Q99873 361 aaKnown RBP12.85□□□□□ -0.35
COL6A1-205ENST00000492851 TUBGCP2Q9BSJ2 902 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 ACE2Q9BYF1 805 aaPredicted RBP12.85□□□□□ -0.35
COL6A1-205ENST00000492851 KDM4CQ9H3R0 1056 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 ZMIZ1Q9ULJ6 1067 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 STAP1Q9ULZ2 295 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 PCDH15Q96QU1 1955 aa12.85□□□□□ -0.35
COL6A1-205ENST00000492851 TPRP12270 2363 aaKnown RBP12.84□□□□□ -0.35
COL6A1-205ENST00000492851 A0A1W2PPC4 97 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 TTC34A8MYJ7 566 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 FOXN3O00409 490 aaPredicted RBP12.84□□□□□ -0.35
COL6A1-205ENST00000492851 VILLO15195 856 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 MID1O15344 667 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 SLC7A4O43246 635 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CBFA2T3O75081 653 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 TOP3BO95985 862 aaKnown RBP12.84□□□□□ -0.35
COL6A1-205ENST00000492851 FTH1P19P0C7X4 201 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CLCN1P35523 988 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 NUDT1P36639 197 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 GRK6P43250 576 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CCR5P51681 352 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 FAM193AP78312 1265 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 CCDC15Q0P6D6 951 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
COL6A1-205ENST00000492851 SLC45A4Q5BKX6 768 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 BRMS1LQ5PSV4 323 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 MMS22LQ6ZRQ5 1243 aa12.84□□□□□ -0.35
COL6A1-205ENST00000492851 PASD1Q8IV76 773 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms