RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 ZBTB16Q05516 673 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 SLC14A1Q13336 389 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 EIF4EBP2Q13542 120 aaPredicted RBP17.83■□□□□ 0.44
SGMS1-204ENST00000492601 VWA3BQ502W6 1294 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 EFHC1Q5JVL4 640 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 C11orf57Q6ZUT1 292 aaPredicted RBP17.83■□□□□ 0.44
SGMS1-204ENST00000492601 C1orf216Q8TAB5 229 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 RPL10LQ96L21 214 aaKnown RBP17.83■□□□□ 0.44
SGMS1-204ENST00000492601 PRMT1Q99873 361 aaKnown RBP17.83■□□□□ 0.44
SGMS1-204ENST00000492601 ADAM33Q9BZ11 813 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 NDST4Q9H3R1 872 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 GAREM1Q9H706 876 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 SYNCQ9H7C4 482 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 SLCO3A1Q9UIG8 710 aa17.83■□□□□ 0.44
SGMS1-204ENST00000492601 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.83■□□□□ 0.44
SGMS1-204ENST00000492601 A0A1B0GVT2 93 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 PES1O00541 588 aaKnown RBP17.82■□□□□ 0.44
SGMS1-204ENST00000492601 RNASEH1O60930 286 aaKnown RBP17.82■□□□□ 0.44
SGMS1-204ENST00000492601 GLI1P08151 1106 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 SRPRAP08240 638 aaKnown RBP17.82■□□□□ 0.44
SGMS1-204ENST00000492601 PDGFRAP16234 1089 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 ABCB4P21439 1286 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 CCR1P32246 355 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 STK19P49842 368 aaPredicted RBP17.82■□□□□ 0.44
SGMS1-204ENST00000492601 ECT2LQ008S8 904 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 NME3Q13232 169 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 PTPN20Q4JDL3 420 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 MIIPQ5JXC2 388 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 C9orf64Q5T6V5 341 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 RNF219Q5W0B1 726 aaPredicted RBP17.82■□□□□ 0.44
SGMS1-204ENST00000492601 OLFML1Q6UWY5 402 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 UNQ6494/PRO21346Q6UXR6 183 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 NAXDQ8IW45 347 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 CCAR2Q8N163 923 aaKnown RBP17.82■□□□□ 0.44
SGMS1-204ENST00000492601 BIRC7Q96CA5 298 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 TUBGCP2Q9BSJ2 902 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 NUP62CLQ9H1M0 184 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 PABPC3Q9H361 631 aaKnown RBP17.82■□□□□ 0.44
SGMS1-204ENST00000492601 ASNSD1Q9NWL6 643 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 FBXL12Q9NXK8 326 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 PCDHB9Q9Y5E1 797 aa17.82■□□□□ 0.44
SGMS1-204ENST00000492601 PLXNB3Q9ULL4 1909 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 EDDM13A0A1B0GTR0 161 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 FAM47DPA6NHR8 397 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 MID1O15344 667 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 CER1O95813 267 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 SLC2A3P11169 496 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 GGCXP38435 758 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 MATKP42679 507 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 SLC6A3Q01959 620 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 CENPCQ03188 943 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 RAPGEF1Q13905 1077 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 TRIP6Q15654 476 aaKnown RBP17.81■□□□□ 0.44
SGMS1-204ENST00000492601 HLA-BQ31612 363 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 RABGAP1LQ5R372 815 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 DPY19L2P1Q6NXN4 242 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 MMAAQ8IVH4 418 aaKnown RBP17.81■□□□□ 0.44
SGMS1-204ENST00000492601 FAM71AQ8IYT1 594 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 SGK2Q9HBY8 427 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 SERGEFQ9UGK8 458 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 KLK13Q9UKR3 277 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 NCKAP1Q9Y2A7 1128 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 FNDC3AQ9Y2H6 1198 aaKnown RBP17.81■□□□□ 0.44
SGMS1-204ENST00000492601 FHOD1Q9Y613 1164 aa17.81■□□□□ 0.44
SGMS1-204ENST00000492601 A0A1B0GVM2 712 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 A0A1W2PP55 124 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 TCAF2A6NFQ2 919 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 DAB1O75553 588 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 PROS1P07225 676 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 MZF1P28698 734 aaPredicted RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 ERCC5P28715 1186 aaPredicted RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 PSMD8P48556 350 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 IRAK1P51617 712 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 AFF3P51826 1226 aaKnown RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 SNX16P57768 344 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 RNASE9P60153 205 aaKnown RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 KCNMA1Q12791 1236 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 HNRNPDQ14103 355 aaKnown RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 DRAP1Q14919 205 aaPredicted RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 CST6Q15828 149 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 FBXL22Q6P050 247 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 IL27RAQ6UWB1 636 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 LAYNQ6UX15 382 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 STK40Q8N2I9 435 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 KDM1BQ8NB78 822 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 SETD7Q8WTS6 366 aaKnown RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 IGSF8Q969P0 613 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 RPRD1AQ96P16 312 aaPredicted RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 OMDQ99983 421 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 PDCL3Q9H2J4 239 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 TM9SF3Q9HD45 589 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 SAMSN1Q9NSI8 373 aaKnown RBP17.8■□□□□ 0.44
SGMS1-204ENST00000492601 DACH1Q9UI36 760 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 VANGL2Q9ULK5 521 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 SCML1Q9UN30 329 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 ZZEF1O43149 2961 aa17.8■□□□□ 0.44
SGMS1-204ENST00000492601 ITIH6Q6UXX5 1313 aa17.79■□□□□ 0.44
SGMS1-204ENST00000492601 TARSL2A2RTX5 802 aaKnown RBP17.79■□□□□ 0.44
SGMS1-204ENST00000492601 M0QYT0 321 aa17.79■□□□□ 0.44
SGMS1-204ENST00000492601 RNASEH2AO75792 299 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms