RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 HMBSP08397 361 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 MMEP08473 750 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 TMEM253P0C7T8 217 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 CHRNB1P11230 501 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 EZRP15311 586 aaKnown RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 CHRNB2P17787 502 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 SLC8A1P32418 973 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 SOX5P35711 763 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 DHX34Q14147 1143 aaKnown RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 TAF5Q15542 800 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 DENND2CQ68D51 928 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 RHBDF2Q6PJF5 856 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 HTR3DQ70Z44 454 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 DNAAF5Q86Y56 855 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 CCDC197Q8NCU1 140 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 EPS8L1Q8TE68 723 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 IRGQQ8WZA9 623 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 CCT6BQ92526 530 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 ATP2A3Q93084 1043 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 CLDN23Q96B33 292 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 PGM2Q96G03 612 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 ERP44Q9BS26 406 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 TXLNGYQ9BZA5 131 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 FAM129AQ9BZQ8 928 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 TRIM31Q9BZY9 425 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 PABPC3Q9H361 631 aaKnown RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
BRCA1-219ENST00000491747 SH3BP1Q9Y3L3 701 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 DAAM1Q9Y4D1 1078 aa9.73□□□□□ -0.85
BRCA1-219ENST00000491747 ANTXRLA6NF34 631 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 DNAJC8O75937 253 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-219ENST00000491747 LTFP02788 710 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 ERBB2P04626 1255 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 DRD4P21917 467 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 GBP1P32455 592 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 GALK1P51570 392 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 DRG2P55039 364 aaKnown RBP9.72□□□□□ -0.85
BRCA1-219ENST00000491747 BPIFB4P59827 614 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 PPARDQ03181 441 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 TCF15Q12870 199 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 DHCR24Q15392 516 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 PTPN20Q4JDL3 420 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 Q6ZNB5 142 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 CPA6Q8N4T0 437 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 KIAA1958Q8N8K9 716 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 DTWD2Q8NBA8 298 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 SLC35G2Q8TBE7 412 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 EZH1Q92800 747 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-219ENST00000491747 OSBPL6Q9BZF3 934 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 LMAN1LQ9HAT1 526 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 ABCC13Q9NSE7 274 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 HAUS2Q9NVX0 235 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 MARCH2Q9P0N8 246 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 NAALADL1Q9UQQ1 740 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 F5P12259 2224 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 SLC12A8A0AV02 714 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 MSI1O43347 362 aaKnown RBP9.72□□□□□ -0.85
BRCA1-219ENST00000491747 FBXO21O94952 628 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 CDH5P33151 784 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-219ENST00000491747 OPRD1P41143 372 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 ACADSBP45954 432 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 SLC6A11P48066 632 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 PMS2P54278 862 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 MESP2Q0VG99 397 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 GAS6Q14393 721 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 SPRED3Q2MJR0 410 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 LY6G5CQ5SRR4 150 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 SYPL2Q5VXT5 272 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 DUPD1Q68J44 220 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 FSTL4Q6MZW2 842 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 C12orf40Q86WS4 652 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 TMEM25Q86YD3 366 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 SLC30A5Q8TAD4 765 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 NELL2Q99435 816 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 TRIM51Q9BSJ1 452 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 STMN4Q9H169 189 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-219ENST00000491747 OSGEPQ9NPF4 335 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 MCM8Q9UJA3 840 aa9.72□□□□□ -0.85
BRCA1-219ENST00000491747 TRDMT1O14717 391 aaKnown RBP9.71□□□□□ -0.85
BRCA1-219ENST00000491747 GALR2O43603 387 aaPredicted RBP9.71□□□□□ -0.85
BRCA1-219ENST00000491747 NFATC1O95644 943 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 GSTA1P08263 222 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 FMO1Q01740 532 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 ITIH4Q14624 930 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 C2CD6Q53TS8 623 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 TMEM196Q5HYL7 178 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 MSANTD2Q6P1R3 559 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 FAM183BPQ6ZVS7 135 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 SFTPA1Q8IWL2 248 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 MSANTD3Q96H12 275 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 CDK5RAP1Q96SZ6 601 aaKnown RBP9.71□□□□□ -0.85
BRCA1-219ENST00000491747 ZDHHC18Q9NUE0 388 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.71□□□□□ -0.85
BRCA1-219ENST00000491747 SAMD15Q9P1V8 674 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 TBC1D14Q9P2M4 693 aa9.71□□□□□ -0.85
BRCA1-219ENST00000491747 MRPS17Q9Y2R5 130 aaKnown RBP9.71□□□□□ -0.85
BRCA1-219ENST00000491747 CCT8L1PA6NM43 557 aa9.71□□□□□ -0.86
BRCA1-219ENST00000491747 SLC9A3R1O14745 358 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 RGS16O15492 202 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-219ENST00000491747 DDX3YO15523 660 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms