RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	LMLN	Q96KR4	655 aa		19.97	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	MRGPRX3	Q96LB0	322 aa		19.97	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	KDM4C	Q9H3R0	1056 aa		19.97	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	ERVW-1	Q9UQF0	538 aa		19.97	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	DMTF1	Q9Y222	760 aa		19.97	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	PTPN13	Q12923	2485 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	TYW5	A2RUC4	315 aa	Known RBP	19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	TTC34	A8MYJ7	566 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	PDXK	O00764	312 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	SPTLC2	O15270	562 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	NR3C1	P04150	777 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	LINC00301	Q8NCQ3	95 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	TAS1R2	Q8TE23	839 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	DDX50	Q9BQ39	737 aa	Known RBP	19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	ABCG4	Q9H172	646 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	ARHGAP20	Q9P2F6	1191 aa		19.96	■□□□□ 0.79
CDK5RAP2-218	ENST00000491334	GOLGA6L7	A0A1B0GV03	622 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PPP6R2	O75170	966 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	MOCS3	O95396	460 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	IL1B	P01584	269 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SYT1	P21579	422 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	GCLM	P48507	274 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	RNF219	Q5W0B1	726 aa	Predicted RBP	19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	NUGGC	Q68CJ6	796 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	BHLHA9	Q7RTU4	235 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	STK40	Q8N2I9	435 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SLC4A11	Q8NBS3	891 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	HJURP	Q8NCD3	748 aa	Predicted RBP	19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	OR4C6	Q8NH72	309 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	AZIN2	Q96A70	460 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CCDC97	Q96F63	343 aa	Predicted RBP	19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	FAXDC2	Q96IV6	333 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	VCPIP1	Q96JH7	1222 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	IL17B	Q9UHF5	180 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	INTS6	Q9UL03	887 aa	Known RBP	19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SSUH2	Q9Y2M2	353 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CEP83	Q9Y592	693 aa		19.95	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334		K7ENP7	123 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	XPO1	O14980	1071 aa	Known RBP	19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	POLR2D	O15514	142 aa	Known RBP	19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	MSI1	O43347	362 aa	Known RBP	19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ACSL4	O60488	711 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CS	O75390	466 aa	Known RBP	19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CKMT1A	P12532	417 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	DGKA	P23743	735 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	RAD23B	P54727	409 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PPP2CB	P62714	309 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PPP2CA	P67775	309 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ECT2L	Q008S8	904 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CUL4B	Q13620	913 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	INO80C	Q6PI98	192 aa	Predicted RBP	19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PRICKLE2	Q7Z3G6	844 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	TMC6	Q7Z403	805 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CARNMT1	Q8N4J0	409 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	KLHDC7B	Q96G42	594 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	KCTD10	Q9H3F6	313 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ASCL3	Q9NQ33	180 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CISH	Q9NSE2	258 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	EVA1B	Q9NVM1	165 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CYTH4	Q9UIA0	394 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SLCO3A1	Q9UIG8	710 aa		19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	HEMK1	Q9Y5R4	338 aa	Predicted RBP	19.94	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	YJEFN3	A6XGL0	299 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334		E7ENQ6	273 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PRAMEF26	H0Y7S4	382 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	MAPK13	O15264	365 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CUTA	O60888	179 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	GP1BA	P07359	652 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ALPPL2	P10696	532 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PDIA4	P13667	645 aa	Known RBP	19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	RBMS1	P29558	406 aa	Known RBP	19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	MAT2A	P31153	395 aa	Known RBP	19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SLC6A4	P31645	630 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	NNMT	P40261	264 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	AFM	P43652	599 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	STK4	Q13043	487 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CDH18	Q13634	790 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ELAVL3	Q14576	367 aa	Known RBP	19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	FAM133B	Q5BKY9	247 aa	Known RBP	19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PTPRN2	Q92932	1015 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	FAM117A	Q9C073	453 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	OSBPL2	Q9H1P3	480 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ITIH6	Q6UXX5	1313 aa		19.93	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SLC7A4	O43246	635 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	MZF1	P28698	734 aa	Predicted RBP	19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	DUSP3	P51452	185 aa	Predicted RBP	19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SRSF1	Q07955	248 aa	Known RBP eCLIP	19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PPP3CA	Q08209	521 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	ADIG	Q0VDE8	80 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	CUL4A	Q13619	759 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	C8orf34	Q49A92	452 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SETMAR	Q53H47	684 aa	Predicted RBP	19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SGO2	Q562F6	1265 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	PITRM1	Q5JRX3	1037 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	SHC4	Q6S5L8	630 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	IGF2-AS	Q6U949	168 aa		19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	INTS8	Q75QN2	995 aa	Known RBP	19.92	■□□□□ 0.78
CDK5RAP2-218	ENST00000491334	LURAP1L	Q8IV03	231 aa		19.92	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms