RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 C10orf76Q5T2E6 689 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 PXDC1Q5TGL8 231 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF474Q6S9Z5 364 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 CYB5R4Q7L1T6 521 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 CPXCR1Q8N123 301 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 ADAD1Q96M93 576 aaKnown RBP5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 TUBB6Q9BUF5 446 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 TRIM31Q9BZY9 425 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 CLPBQ9H078 707 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 MOV10Q9HCE1 1003 aaKnown RBP5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 TMEM45AQ9NWC5 275 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 TRNAU1APQ9NX07 287 aaKnown RBP5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 RRP7AQ9Y3A4 280 aaKnown RBP5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 PCDHGB3Q9Y5G1 929 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 LMTK3Q96Q04 1460 aa5.42□□□□□ -1.54
HMGB1P38-201ENST00000490557 WDR91A4D1P6 747 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 PLEKHD1A6NEE1 506 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 MCIDASD6RGH6 385 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 MSI1O43347 362 aaKnown RBP5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 CCNT1O60563 726 aaKnown RBP5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 TK1P04183 234 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 CIITAP33076 1130 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 CFHR1Q03591 330 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 CDK18Q07002 472 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 GOLGA8FQ08AF8 430 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 GALNT3Q14435 633 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 TAF12Q16514 161 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 RUNDC3AQ59EK9 446 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 KIAA1324Q6UXG2 1013 aaKnown RBP5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 UBE2Q1Q7Z7E8 422 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 PTGR2Q8N8N7 351 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 MYRIPQ8NFW9 859 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 OR52N4Q8NGI2 321 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 CEP70Q8NHQ1 597 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 SPPL3Q8TCT6 385 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF347Q96SE7 839 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 GATA5Q9BWX5 397 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 ABHD16BQ9H3Z7 469 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 PAPOLBQ9NRJ5 636 aaKnown RBP5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 TMEM184CQ9NVA4 438 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 TUBA8Q9NY65 449 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 DGKBQ9Y6T7 804 aa5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 ZNF335Q9H4Z2 1342 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P38-201ENST00000490557 ADAM10O14672 748 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 CTSAP10619 480 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 HSD3B1P14060 373 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 GSTM2P28161 218 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 STAT1P42224 750 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 DCTN1Q14203 1278 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 Q4G0T1 1027 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 LRRC24Q50LG9 513 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 ARL13AQ5H913 290 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 COLEC12Q5KU26 742 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 SHC4Q6S5L8 630 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 TMEM200AQ86VY9 491 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 KLBQ86Z14 1044 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 VPS52Q8N1B4 723 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 NANOGP1Q8N7R0 232 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 ANKRD44Q8N8A2 993 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 ARL14EPQ8N8R7 260 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 ATP2A3Q93084 1043 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 RPL36ALQ969Q0 106 aaKnown RBP5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 RILPL2Q969X0 211 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 RBM17Q96I25 401 aaKnown RBP5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 PYM1Q9BRP8 204 aaKnown RBP5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 PLEKHA2Q9HB19 425 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 NOD2Q9HC29 1040 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 MLXIPLQ9NP71 852 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 ARL15Q9NXU5 204 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 MTMR4Q9NYA4 1195 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 FEM1BQ9UK73 627 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 DERAQ9Y315 318 aa5.4□□□□□ -1.54
HMGB1P38-201ENST00000490557 DNAJC9-AS1A6NH13 148 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 FAM90A20PA6NIJ5 464 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 SYN3O14994 580 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 PRPF4O43172 522 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 CYP19A1P11511 503 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 TNNT1P13805 278 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 CHN1P15882 459 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 HOXB9P17482 250 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 PRPH2P23942 346 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 PNPLA4P41247 253 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 ADPRHP54922 357 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 GXYLT1Q4G148 440 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 CTXN3Q4LDR2 81 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 FBXO47Q5MNV8 452 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 ZKSCAN2Q63HK3 967 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 RASGRP2Q7LDG7 609 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 SUGP1Q8IWZ8 645 aaKnown RBP5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 SMAP1Q8IYB5 467 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 PAQR4Q8N4S7 273 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 PIGOQ8TEQ8 1089 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 GCC1Q96CN9 775 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 KTI12Q96EK9 354 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 COG8Q96MW5 612 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 NPAS1Q99742 590 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 TWSG1Q9GZX9 223 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 SUFUQ9UMX1 484 aa5.39□□□□□ -1.55
HMGB1P38-201ENST00000490557 B9A039 149 aa5.38□□□□□ -1.55
HMGB1P38-201ENST00000490557 RHODO00212 210 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms