RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 MPP4Q96JB8 637 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 TEPSINQ96N21 525 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 HAPLN3Q96S86 360 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 OSBPL9Q96SU4 736 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 BDH2Q9BUT1 245 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 ELAC1Q9H777 363 aaKnown RBP5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 UNKLQ9H9P5 680 aaKnown RBP5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 FSCN3Q9NQT6 498 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 VPS51Q9UID3 782 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 SLC27A6Q9Y2P4 619 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 TCAF1Q9Y4C2 921 aa5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.47□□□□□ -1.53
SSX2IP-208ENST00000490476 TENM4Q6N022 2769 aa5.46□□□□□ -1.53
SSX2IP-208ENST00000490476 IGF2RP11717 2491 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 HMGB1P1B2RPK0 211 aaPredicted RBP5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 H0Y3Z8 333 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 PSMD14O00487 310 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 EPB41L2O43491 1005 aaKnown RBP5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 TAF5LO75529 589 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 CDKL5O76039 1030 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 ITGB3P05106 788 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 RPS12P25398 132 aaKnown RBP5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 DDX6P26196 483 aaKnown RBP eCLIP5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 RBL1P28749 1068 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 PAPOLAP51003 745 aaKnown RBP5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 PRKCZQ05513 592 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 TOB2Q14106 344 aaPredicted RBP5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 IZUMO1Q8IYV9 350 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 CHST13Q8NET6 341 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 WDR60Q8WVS4 1066 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 ASB12Q8WXK4 309 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 EDAQ92838 391 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 BOD1Q96IK1 185 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 COG8Q96MW5 612 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 INO80BQ9C086 356 aaPredicted RBP5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 ZCWPW1Q9H0M4 648 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 DAPP1Q9UN19 280 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 JAG2Q9Y219 1238 aa5.46□□□□□ -1.54
SSX2IP-208ENST00000490476 FRYLO94915 3013 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 RLFQ13129 1914 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 GAGE12BA1L429 117 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 GAGE12HA6NDE8 117 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 ERVV-2B6SEH9 535 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 KIF28PB7ZC32 967 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 EYA2O00167 538 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 TLR2O60603 784 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 FAM155BO75949 473 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 CER1O95813 267 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 CYP19A1P11511 503 aaPredicted RBP5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 DRD1P21728 446 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 ACRV1P26436 265 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 TBX2Q13207 712 aaPredicted RBP5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 SLC12A1Q13621 1099 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 PRKD1Q15139 912 aaPredicted RBP5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 SP5Q6BEB4 398 aaPredicted RBP5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 RAB11FIP2Q7L804 512 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 MAATS1Q7Z4T9 603 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 LRRTM4Q86VH4 590 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 NBPF5PQ86XG9 351 aaPredicted RBP5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 PALM2Q8IXS6 379 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 ZNF276Q8N554 614 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 METTL25Q8N6Q8 603 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 SUPT20HQ8NEM7 779 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 TOR1AIP2Q8NFQ8 470 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 SPPL3Q8TCT6 385 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 LPIN2Q92539 896 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 GLG1Q92896 1179 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 R3HDM4Q96D70 268 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 PTCD3Q96EY7 689 aaKnown RBP5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 ZDHHC12Q96GR4 267 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 CLMNQ96JQ2 1002 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 GPR20Q99678 358 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 FSD1Q9BTV5 496 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 GLOD4Q9HC38 313 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 CD248Q9HCU0 757 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 PDP2Q9P2J9 529 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 ZNF69Q9UC07 566 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 RIMKLBQ9ULI2 386 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 DRG1Q9Y295 367 aaKnown RBP5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 ECM29Q5VYK3 1845 aa5.45□□□□□ -1.54
SSX2IP-208ENST00000490476 FLT4P35916 1363 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 DSPP15924 2871 aaKnown RBP5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 OR2W5A6NFC9 320 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 PRRT4C9JH25 899 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 TCERG1O14776 1098 aaKnown RBP5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 RPP40O75818 363 aaKnown RBP5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 RHOP08100 348 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 TNFAIP3P21580 790 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 CLCN2P51788 898 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 TIAL1Q01085 375 aaKnown RBP eCLIP5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 BFSP2Q13515 415 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 FHL3Q13643 280 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 CSHL1Q14406 222 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 SF3B3Q15393 1217 aaKnown RBP5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 FAM110CQ1W6H9 321 aa5.44□□□□□ -1.54
SSX2IP-208ENST00000490476 BEAN1Q3B7T3 259 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms