RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ADAMTS14Q8WXS8 1223 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 SORCS1Q8WY21 1168 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 GATA6Q92908 595 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 TTC17Q96AE7 1141 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 BTN2A3PQ96KV6 586 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 PCMTD1Q96MG8 357 aaPredicted RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 GANQ9H2C0 597 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 GAREM1Q9H706 876 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 POPDC2Q9HBU9 364 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 ST7Q9NRC1 585 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 KIAA1522Q9P206 1035 aaPredicted RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 TJP2Q9UDY2 1190 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 EIF2B4Q9UI10 523 aaKnown RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 ZMIZ1Q9ULJ6 1067 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 CLEC4EQ9ULY5 219 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 TARSL2A2RTX5 802 aaKnown RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 HYAL3O43820 417 aaPredicted RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 SH3BP5O60239 455 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 GLI1P08151 1106 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 CD27P26842 260 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 MAOBP27338 520 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 SULT2A1Q06520 285 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 HS1BP3Q53T59 392 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 FAM133BQ5BKY9 247 aaKnown RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 RNF219Q5W0B1 726 aaPredicted RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 RAB44Q7Z6P3 723 aaPredicted RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 SCUBE3Q8IX30 993 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 WDTC1Q8N5D0 677 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 ATP6V0D2Q8N8Y2 350 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 ZCCHC14Q8WYQ9 949 aaKnown RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 SNX19Q92543 992 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 ANP32BQ92688 251 aaKnown RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 ERLEC1Q96DZ1 483 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 P2RY11Q96G91 374 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 NOX5Q96PH1 765 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 ERGIC2Q96RQ1 377 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 TMEM121BQ9BXQ6 578 aaPredicted RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 NLRC4Q9NPP4 1024 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 CD93Q9NPY3 652 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 PRSS16Q9NQE7 514 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 TM7SF3Q9NS93 570 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.72□□□□□ -0.69
TTC28-207ENST00000490475 CYTH4Q9UIA0 394 aa10.72□□□□□ -0.69
TTC28-207ENST00000490475 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.72□□□□□ -0.69
TTC28-207ENST00000490475 FAM170AA1A519 330 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 LRRC72A6NJI9 287 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 YKT6O15498 198 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 LUC7L3O95232 432 aaKnown RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 HLA-EP13747 358 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 ABCB4P21439 1286 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 KRT9P35527 623 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 NUDT1P36639 197 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 BPIFB4P59827 614 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 RPS14P62263 151 aaKnown RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 YWHAZP63104 245 aaKnown RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 NUMA1Q14980 2115 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 NR1I3Q14994 352 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 PTPRNQ16849 979 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 HLA-BQ31612 363 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 HNRNPA1L2Q32P51 320 aaKnown RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 MS4A13Q5J8X5 152 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 ACBD5Q5T8D3 534 aaPredicted RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 TAF3Q5VWG9 929 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 RFWD3Q6PCD5 774 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 DBX2Q6ZNG2 339 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 ADAT2Q7Z6V5 191 aaKnown RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 TMEM110Q86TL2 294 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 FAM124AQ86V42 546 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 PASD1Q8IV76 773 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 NEK11Q8NG66 645 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 C1orf216Q8TAB5 229 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 DQX1Q8TE96 717 aaKnown RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 GANCQ8TET4 914 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 SETD7Q8WTS6 366 aaKnown RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 CLEC4CQ8WTT0 213 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 CYB5D2Q8WUJ1 264 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 IGSF8Q969P0 613 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 SLC39A13Q96H72 371 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 FCRL2Q96LA5 508 aaPredicted RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 SLC4A5Q9BY07 1137 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 MIS12Q9H081 205 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 RSPH9Q9H1X1 276 aaPredicted RBP10.71□□□□□ -0.69
TTC28-207ENST00000490475 FSCN3Q9NQT6 498 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 ASNSD1Q9NWL6 643 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 PCOLCE2Q9UKZ9 415 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 FZD4Q9ULV1 537 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 CEP83Q9Y592 693 aa10.71□□□□□ -0.69
TTC28-207ENST00000490475 MUC22E2RYF6 1773 aaPredicted RBP10.7□□□□□ -0.7
TTC28-207ENST00000490475 FRYQ5TBA9 3013 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 ANKRD11Q6UB99 2663 aaPredicted RBP10.7□□□□□ -0.7
TTC28-207ENST00000490475 ITIH6Q6UXX5 1313 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 A0A1B0GTH6 734 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 EDDM13A0A1B0GTR0 161 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 F5H5T6 163 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 F8VZ95 297 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 PCDHGA12O60330 932 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 GFPT2O94808 682 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 ADH1BP00325 375 aa10.7□□□□□ -0.7
TTC28-207ENST00000490475 SERPINC1P01008 464 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms