RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 NCAPHQ15003 741 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 TGIF1Q15583 401 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 ARSHQ5FYA8 562 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 MDH1BQ5I0G3 518 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 ADALQ6DHV7 355 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 USP30Q70CQ3 517 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 RUFY3Q7L099 469 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 DPH6Q7L8W6 267 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 HPS3Q969F9 1004 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 MIB2Q96AX9 1013 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 GRAMD1AQ96CP6 724 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 ELOVL4Q9GZR5 314 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 CAAP1Q9H8G2 361 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 FBRSQ9HAH7 460 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 PRSS16Q9NQE7 514 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 AASDHPPTQ9NRN7 309 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 UCKL1Q9NWZ5 548 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 LARSQ9P2J5 1176 aaKnown RBP7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 ORC3Q9UBD5 711 aaPredicted RBP7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 ACSL6Q9UKU0 697 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 AGO2Q9UKV8 859 aaKnown RBP7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 MED13LQ71F56 2210 aa7.47□□□□□ -1.21
PDLIM1-203ENST00000490391 SCN8AQ9UQD0 1980 aa7.46□□□□□ -1.21
PDLIM1-203ENST00000490391 FAM47DPA6NHR8 397 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 PAX4O43316 350 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 LATO43561 262 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 CDC45O75419 566 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 TNFSF15O95150 251 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 IL18RAPO95256 599 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 KLKB1P03952 638 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 ITGA2BP08514 1039 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 SCP2P22307 547 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 WARSP23381 471 aaKnown RBP7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 PSMA5P28066 241 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 CCR5P51681 352 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 SLC5A3P53794 718 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 SLC12A3P55017 1021 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 CYP4F2P78329 520 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 MORC3Q14149 939 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 E2F5Q15329 346 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 ZNF174Q15697 407 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 TTC31Q49AM3 519 aaPredicted RBP7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 TMC6Q7Z403 805 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 BRSK2Q8IWQ3 736 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 ZC3H3Q8IXZ2 948 aaKnown RBP7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 ARL14Q8N4G2 192 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 SYT2Q8N9I0 419 aaPredicted RBP7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 MFSD2AQ8NA29 543 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 NSUN7Q8NE18 718 aaKnown RBP7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 ZSWIM2Q8NEG5 633 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 SPATA20Q8TB22 786 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 EPS8L1Q8TE68 723 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 SERAC1Q96JX3 654 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 APOLD1Q96LR9 279 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 KCNK16Q96T55 309 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 CIPCQ9C0C6 399 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 OSBPL2Q9H1P3 480 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 ADNPQ9H2P0 1102 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 IKZF4Q9H2S9 585 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 PABPC3Q9H361 631 aaKnown RBP7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 ANAPC2Q9UJX6 822 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 LSM7Q9UK45 103 aaKnown RBP7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 ITGA11Q9UKX5 1188 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 PCDHGA7Q9Y5G6 932 aa7.46□□□□□ -1.22
PDLIM1-203ENST00000490391 K7ENM7 598 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 CLDN5O00501 218 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 PFKFB2O60825 505 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 THEGLP0DJG4 465 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 DGKAP23743 735 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 HARS2P49590 506 aaKnown RBP7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 ZNF131P52739 623 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 PPP2CBP62714 309 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 PPP2CAP67775 309 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 GTF2BQ00403 316 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 BMP2KLQ5H9B9 411 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 ZNF776Q68DI1 518 aaPredicted RBP7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 HS2ST1Q7LGA3 356 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 IQCHQ86VS3 1027 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 CSGALNACT2Q8N6G5 542 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 OR2T34Q8NGX1 318 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 WDR36Q8NI36 951 aaKnown RBP7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 MAPK15Q8TD08 544 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 CYB5D2Q8WUJ1 264 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 WASF1Q92558 559 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 GOLGA1Q92805 767 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 MRPL45Q9BRJ2 306 aaKnown RBP7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 B3GNT5Q9BYG0 378 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 KRTAP4-9Q9BYQ8 210 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 NACA2Q9H009 215 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 RSPH9Q9H1X1 276 aaPredicted RBP7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 KDM4CQ9H3R0 1056 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 DPEP3Q9H4B8 488 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 OSER1Q9NX31 292 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 FBXL12Q9NXK8 326 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 KCND2Q9NZV8 630 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 ARHGAP20Q9P2F6 1191 aa7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 MAP1AP78559 2803 aaPredicted RBP7.45□□□□□ -1.22
PDLIM1-203ENST00000490391 LRRC72A6NJI9 287 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 MDM4O15151 490 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 CASC3O15234 703 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms