RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TOE1Q96GM8 510 aaKnown RBP20.39■□□□□ 0.85
SMC4-222ENST00000490207 MYO19Q96H55 970 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 TBCBQ99426 244 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 TKTL2Q9H0I9 626 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 PRSS16Q9NQE7 514 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 METTL5Q9NRN9 209 aaKnown RBP20.39■□□□□ 0.85
SMC4-222ENST00000490207 ARHGEF38Q9NXL2 777 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 SUN2Q9UH99 717 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 VANGL2Q9ULK5 521 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 PAXBP1Q9Y5B6 917 aa20.39■□□□□ 0.85
SMC4-222ENST00000490207 MED19A0JLT2 244 aaPredicted RBP20.38■□□□□ 0.85
SMC4-222ENST00000490207 SMTNL1A8MU46 457 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 ADCY5O95622 1261 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 PDGFRAP16234 1089 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 OXTRP30559 389 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 CXCR3P49682 368 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 SLC25A52Q3SY17 297 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 APCDD1Q8J025 514 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 IGSF8Q969P0 613 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 MRGPRX3Q96LB0 322 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 C11orf70Q9BRQ4 267 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 NUSAP1Q9BXS6 441 aaKnown RBP20.38■□□□□ 0.85
SMC4-222ENST00000490207 WDCPQ9H6R7 721 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 WSB2Q9NYS7 404 aaPredicted RBP20.38■□□□□ 0.85
SMC4-222ENST00000490207 ERVW-1Q9UQF0 538 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 PI4KAP42356 2102 aa20.38■□□□□ 0.85
SMC4-222ENST00000490207 ADAMTS9Q9P2N4 1935 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 F9P00740 461 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 IGLV3-19P01714 112 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 SRPRAP08240 638 aaKnown RBP20.37■□□□□ 0.85
SMC4-222ENST00000490207 CTSOP43234 321 aaPredicted RBP20.37■□□□□ 0.85
SMC4-222ENST00000490207 IRAK1P51617 712 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 SLC12A1Q13621 1099 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 RNF219Q5W0B1 726 aaPredicted RBP20.37■□□□□ 0.85
SMC4-222ENST00000490207 TRNP1Q6NT89 227 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 KDM1BQ8NB78 822 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 FOXJ1Q92949 421 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 ZNF419Q96HQ0 510 aaPredicted RBP20.37■□□□□ 0.85
SMC4-222ENST00000490207 GPR174Q9BXC1 333 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 SIK2Q9H0K1 926 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 TMEM59LQ9UK28 342 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 PCDH15Q96QU1 1955 aa20.37■□□□□ 0.85
SMC4-222ENST00000490207 ITIH6Q6UXX5 1313 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 MEI4A8MW99 385 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 CFIP05156 583 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 MMP8P22894 467 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 OXCT1P55809 520 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 RPS14P62263 151 aaKnown RBP20.36■□□□□ 0.85
SMC4-222ENST00000490207 IRX4P78413 519 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 ECT2LQ008S8 904 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 DUOXA1Q1HG43 343 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 HNRNPA1L2Q32P51 320 aaKnown RBP20.36■□□□□ 0.85
SMC4-222ENST00000490207 SYCP2LQ5T4T6 812 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 CXorf57Q6NSI4 855 aaKnown RBP20.36■□□□□ 0.85
SMC4-222ENST00000490207 SLC23A3Q6PIS1 610 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 ARCQ7LC44 396 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 RABEPKQ7Z6M1 372 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 C14orf80Q86SX3 495 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 RGL4Q8IZJ4 473 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 SLC30A5Q8TAD4 765 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 CEP76Q8TAP6 659 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 CFAP57Q96MR6 1250 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 MTG2Q9H4K7 406 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 TMEM9BQ9NQ34 198 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 ANLNQ9NQW6 1124 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 TMEM51Q9NW97 253 aa20.36■□□□□ 0.85
SMC4-222ENST00000490207 C4orf47A7E2U8 309 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 TEX33O43247 280 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 SIN3BO75182 1162 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 DNTTP04053 509 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 C7P10643 843 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 UNGP13051 313 aaPredicted RBP20.35■□□□□ 0.85
SMC4-222ENST00000490207 MZF1P28698 734 aaPredicted RBP20.35■□□□□ 0.85
SMC4-222ENST00000490207 RDXP35241 583 aaKnown RBP20.35■□□□□ 0.85
SMC4-222ENST00000490207 NSFP46459 744 aaKnown RBP20.35■□□□□ 0.85
SMC4-222ENST00000490207 NUMBP49757 651 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 ZNF165P49910 485 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 ZBTB16Q05516 673 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 CLEC16AQ2KHT3 1053 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 KLHL40Q2TBA0 621 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 TTC31Q49AM3 519 aaPredicted RBP20.35■□□□□ 0.85
SMC4-222ENST00000490207 C5orf22Q49AR2 442 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 PPM1JQ5JR12 505 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 WDR45BQ5MNZ6 344 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 ZNF776Q68DI1 518 aaPredicted RBP20.35■□□□□ 0.85
SMC4-222ENST00000490207 FAM124AQ86V42 546 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 EMC1Q8N766 993 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 PCDHB18PQ96TA0 734 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 FUCA2Q9BTY2 467 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 NUP58Q9BVL2 599 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 SEPT11Q9NVA2 429 aaKnown RBP20.35■□□□□ 0.85
SMC4-222ENST00000490207 DOCK4Q8N1I0 1966 aa20.35■□□□□ 0.85
SMC4-222ENST00000490207 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.34■□□□□ 0.85
SMC4-222ENST00000490207 EDDM13A0A1B0GTR0 161 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 TTC34A8MYJ7 566 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 I6L893 689 aaPredicted RBP20.34■□□□□ 0.85
SMC4-222ENST00000490207 CLDN11O75508 207 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 KCNA4P22459 653 aa20.34■□□□□ 0.85
SMC4-222ENST00000490207 STK19P49842 368 aaPredicted RBP20.34■□□□□ 0.85
SMC4-222ENST00000490207 CDH4P55283 916 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms