RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 MAGIXQ9H6Y5 334 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 CYP39A1Q9NYL5 469 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 TAS2R3Q9NYW6 316 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 RCE1Q9Y256 329 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SSX2IPQ9Y2D8 614 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 NRXN1Q9ULB1 1477 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 ARHGAP31Q2M1Z3 1444 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 TRAPPC8Q9Y2L5 1435 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SH2D7A6NKC9 451 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 IFIT3O14879 490 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 HSPA1AP0DMV8 641 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 HSPA1BP0DMV9 641 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 KRT10P13645 584 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 C6P13671 934 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 PRAMEP78395 509 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 CYP4F8P98187 520 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 AIMP1Q12904 312 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 ALCAMQ13740 583 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 KIR3DS1Q14943 382 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 RPE65Q16518 533 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SHROOM1Q2M3G4 852 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 C6orf136Q5SQH8 315 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 HAUS3Q68CZ6 603 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 ACSM6Q6P461 480 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 GGT6Q6P531 493 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SLC23A3Q6PIS1 610 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 CPLX2Q6PUV4 134 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SLC9B2Q86UD5 537 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 LDHDQ86WU2 507 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 BBS10Q8TAM1 723 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 BCL2L2Q92843 193 aaPredicted RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 FAM149B1Q96BN6 582 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 TIGD1Q96MW7 591 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 MECRQ9BV79 373 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 STN1Q9H668 368 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 MRPS18AQ9NVS2 196 aaKnown RBP3.16□□□□□ -1.9
UBXN4-208ENST00000490163 PSD3Q9NYI0 1048 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 SLC45A2Q9UMX9 530 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 ENTPD2Q9Y5L3 495 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 CCNB3Q8WWL7 1395 aa3.16□□□□□ -1.9
UBXN4-208ENST00000490163 FAM86B1E9PN63 330 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 COQ9O75208 318 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 HAUS5O94927 633 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 OPN1MWP04001 364 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 DANCRP0C864 163 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 OPN1MW2P0DN77 364 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 OPN1MW3P0DN78 364 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 ADRA2CP18825 462 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 MMP8P22894 467 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 HTR6P50406 440 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 SLC12A3P55017 1021 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 EIF2B5Q13144 721 aaKnown RBP3.15□□□□□ -1.9
UBXN4-208ENST00000490163 GRAPQ13588 217 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF273Q14593 569 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 PGM5Q15124 567 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 RARS2Q5T160 578 aaKnown RBP3.15□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF648Q5T619 568 aaPredicted RBP3.15□□□□□ -1.9
UBXN4-208ENST00000490163 FBXO38Q6PIJ6 1188 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 ERN2Q76MJ5 926 aaKnown RBP3.15□□□□□ -1.9
UBXN4-208ENST00000490163 RABEPKQ7Z6M1 372 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 ABI3BPQ7Z7G0 1075 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 CCDC117Q8IWD4 279 aaPredicted RBP3.15□□□□□ -1.9
UBXN4-208ENST00000490163 CNNM3Q8NE01 707 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 TNIP2Q8NFZ5 429 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 DEPDC1BQ8WUY9 529 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 SLC22A12Q96S37 553 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 ANKRD2Q9GZV1 360 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 BRD8Q9H0E9 1235 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 TXNRD2Q9NNW7 524 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 HSPB7Q9UBY9 170 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 TRIM10Q9UDY6 481 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 USP21Q9UK80 565 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 ADAM29Q9UKF5 820 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 PRDM4Q9UKN5 801 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 GDAQ9Y2T3 454 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 NME7Q9Y5B8 376 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 PTPRTO14522 1441 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 NCOA1Q15788 1441 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 C9orf84Q5VXU9 1444 aa3.15□□□□□ -1.9
UBXN4-208ENST00000490163 SLC9B1P1A6NJY1 282 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 GOLGA6L6A8MZA4 724 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 TOMM70O94826 608 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 WDR47O94967 919 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 ALAS1P13196 640 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 AVPR2P30518 371 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 HNF1BP35680 557 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 YBEYP58557 167 aaPredicted RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 MYO1EQ12965 1108 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 RPS6KA1Q15418 735 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 ASTE1Q2TB18 679 aaPredicted RBP3.15□□□□□ -1.91
UBXN4-208ENST00000490163 AMOTQ4VCS5 1084 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 CCDC144NLQ6NUI1 221 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 GADL1Q6ZQY3 521 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 TMEM110Q86TL2 294 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 TMEFF1Q8IYR6 380 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 MMP21Q8N119 569 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 DPP10Q8N608 796 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 POMGNT2Q8NAT1 580 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 MSANTD4Q8NCY6 345 aa3.15□□□□□ -1.91
UBXN4-208ENST00000490163 ZNF540Q8NDQ6 660 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms