RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-218	ENST00000490032	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.25	□□□□□ -1.73
HMGN1-218	ENST00000490032	SGCZ	Q96LD1	299 aa		4.25	□□□□□ -1.73
HMGN1-218	ENST00000490032	SF3B5	Q9BWJ5	86 aa	Known RBP	4.25	□□□□□ -1.73
HMGN1-218	ENST00000490032	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.25	□□□□□ -1.73
HMGN1-218	ENST00000490032	FNIP2	Q9P278	1114 aa		4.25	□□□□□ -1.73
HMGN1-218	ENST00000490032	SLC12A4	Q9UP95	1085 aa		4.25	□□□□□ -1.73
HMGN1-218	ENST00000490032	TNFSF13B	Q9Y275	285 aa		4.25	□□□□□ -1.73
HMGN1-218	ENST00000490032	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	CXorf65	A6NEN9	183 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	PIP5K1B	O14986	540 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	CAND2	O75155	1236 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	PLA2G2A	P14555	144 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	GRK5	P34947	590 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	ADPRH	P54922	357 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	FAM3B	P58499	235 aa	Predicted RBP	4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	RBM6	P78332	1123 aa	Known RBP	4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	TRIM60	Q495X7	471 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	ZNF585B	Q52M93	769 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	CCDC181	Q5TID7	509 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	HMBOX1	Q6NT76	420 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	RINT1	Q6NUQ1	792 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	IQCF1	Q8N6M8	205 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	DEPTOR	Q8TB45	409 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	OIT3	Q8WWZ8	545 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	RSC1A1	Q92681	617 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	URB1-AS1	Q96HZ7	61 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	ADAD1	Q96M93	576 aa	Known RBP	4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	MEIS3	Q99687	375 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	MYD88	Q99836	296 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	NTPCR	Q9BSD7	190 aa	Known RBP	4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	PLK2	Q9NYY3	685 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	RAB21	Q9UL25	225 aa		4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	TRPC5	Q9UL62	973 aa	Predicted RBP	4.24	□□□□□ -1.73
HMGN1-218	ENST00000490032	MCIDAS	D6RGH6	385 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	PRSS44	E7EML9	344 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	PEPD	P12955	493 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	MLH1	P40692	756 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	PMPCA	Q10713	525 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	WASHC2D	Q5SRD0	308 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	C18orf65	Q6ZTR6	163 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	C7orf57	Q8NEG2	295 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	PRPF18	Q99633	342 aa	Known RBP	4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	NPAS1	Q99742	590 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	ISCU	Q9H1K1	167 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	SLCO5A1	Q9H2Y9	848 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	CCDC134	Q9H6E4	229 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	ARNT2	Q9HBZ2	717 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	RNF146	Q9NTX7	359 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	DTX4	Q9Y2E6	619 aa		4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	COPG1	Q9Y678	874 aa	Known RBP	4.23	□□□□□ -1.73
HMGN1-218	ENST00000490032	FAM90A18P	A6NE21	464 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	FAM90A16P	A6NEW6	464 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	FAM90A9P	A6NNJ1	464 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	SLC38A8	A6NNN8	435 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	FAM90A5P	A8MXJ8	464 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	KIF28P	B7ZC32	967 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	MSI1	O43347	362 aa	Known RBP	4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	DNPH1	O43598	174 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	LARGE1	O95461	756 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	FAM90A15P	P0C7V4	464 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	FAM90A14P	P0C7W9	464 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	ABCB4	P21439	1286 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	TNFRSF8	P28908	595 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	STAT1	P42224	750 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	ROR2	Q01974	943 aa	Known RBP	4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	EGR4	Q05215	589 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	PICALM	Q13492	652 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	GALNT3	Q14435	633 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	ENTPD8	Q5MY95	495 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	IL31	Q6EBC2	164 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	DLK2	Q6UY11	383 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	GATAD2A	Q86YP4	633 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	SPATA3	Q8NHX4	192 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	IP6K1	Q92551	441 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	MUL1	Q969V5	352 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	MECR	Q9BV79	373 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	PLAC1	Q9HBJ0	212 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	PNRC2	Q9NPJ4	139 aa	Known RBP	4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	TBC1D14	Q9P2M4	693 aa		4.22	□□□□□ -1.73
HMGN1-218	ENST00000490032	TBC1D3D	A0A087WVF3	549 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBC1D3I	A0A087WXS9	549 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBC1D3E	A0A087X179	549 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBC1D3K	A0A087X1G2	549 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	CLEC18A	A5D8T8	446 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBC1D3B	A6NDS4	549 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBC1D3L	B9A6J9	549 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	ASNA1	O43681	348 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	MYL1	P05976	194 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	TBC1D3H	P0C7X1	549 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	TGFB3	P10600	412 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	HOXA11	P31270	313 aa	Predicted RBP	4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	AKT1	P31749	480 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	KCNJ4	P48050	445 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	CDK7	P50613	346 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	RHAG	Q02094	409 aa		4.21	□□□□□ -1.74
HMGN1-218	ENST00000490032	BTK	Q06187	659 aa		4.21	□□□□□ -1.74

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