RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 SLC12A1Q13621 1099 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 C15orf59Q2T9L4 293 aaPredicted RBP19.72■□□□□ 0.75
EPHB4-207ENST00000489808 PLEKHG6Q3KR16 790 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 SH3PXD2AQ5TCZ1 1133 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 PMS2CLQ68D20 193 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 PPP1R2P3Q6NXS1 205 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 STRADAQ7RTN6 431 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 METTL3Q86U44 580 aaKnown RBP19.72■□□□□ 0.75
EPHB4-207ENST00000489808 FAM131BQ86XD5 332 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 ZNF683Q8IZ20 524 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 APCDD1Q8J025 514 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 VCPIP1Q96JH7 1222 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 MKRN2Q9H000 416 aaKnown RBP19.72■□□□□ 0.75
EPHB4-207ENST00000489808 ARRDC1-AS1Q9H2J1 176 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 SUN2Q9UH99 717 aa19.72■□□□□ 0.75
EPHB4-207ENST00000489808 CLDN11O75508 207 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 PLK1P53350 603 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 COPAP53621 1224 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 CDH4P55283 916 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 CAMK2GQ13555 558 aaPredicted RBP19.71■□□□□ 0.75
EPHB4-207ENST00000489808 RAB6CQ53S08 254 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 CXorf57Q6NSI4 855 aaKnown RBP19.71■□□□□ 0.75
EPHB4-207ENST00000489808 DNAJC24Q6P3W2 148 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 LRRC31Q6UY01 552 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 TMPRSS6Q8IU80 811 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 KDM1BQ8NB78 822 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 SYN2Q92777 582 aaPredicted RBP19.71■□□□□ 0.75
EPHB4-207ENST00000489808 IQCDQ96DY2 449 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 MYO19Q96H55 970 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 MRGPRX3Q96LB0 322 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 RAB6CQ9H0N0 254 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 PRDM16Q9HAZ2 1276 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 CAPN11Q9UMQ6 739 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 TBC1D30Q9Y2I9 924 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 PCDHGA5Q9Y5G8 931 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 CFAP54Q96N23 3096 aa19.71■□□□□ 0.75
EPHB4-207ENST00000489808 TMCO5BA8MYB1 307 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 DDX3XO00571 662 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■□□ 15.1
EPHB4-207ENST00000489808 CNTN5O94779 1100 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 GZMAP12544 262 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 GPD1P21695 349 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 RRM1P23921 792 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 MZF1P28698 734 aaPredicted RBP19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ADRA1BP35368 520 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 CTSOP43234 321 aaPredicted RBP19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ST8SIA6P61647 398 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ECT2LQ008S8 904 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 CSRP2Q16527 193 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 CDO1Q16878 200 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ALFQ53S48 1182 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 PPP1R15BQ5SWA1 713 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ARTNQ5T4W7 220 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 KIAA1324Q6UXG2 1013 aaKnown RBP19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ZNF366Q8N895 744 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 OR2T3Q8NH03 318 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 CPLX3Q8WVH0 158 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ALG14Q96F25 216 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 SIPA1Q96FS4 1042 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 PPP1R9BQ96SB3 815 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 XPO4Q9C0E2 1151 aaKnown RBP19.7■□□□□ 0.74
EPHB4-207ENST00000489808 PRSS16Q9NQE7 514 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ITM2CQ9NQX7 267 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 SEMA4GQ9NTN9 838 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 USP18Q9UMW8 372 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 ERVW-1Q9UQF0 538 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 SDK1Q7Z5N4 2213 aa19.7■□□□□ 0.74
EPHB4-207ENST00000489808 IGLV3-10A0A075B6K4 115 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 IGHV1OR15-9A0A0B4J2B8 117 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 E9PAM4 449 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 FTLP02792 175 aaPredicted RBP19.69■□□□□ 0.74
EPHB4-207ENST00000489808 SRPRAP08240 638 aaKnown RBP19.69■□□□□ 0.74
EPHB4-207ENST00000489808 C7P10643 843 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 ZNF143P52747 638 aaPredicted RBP19.69■□□□□ 0.74
EPHB4-207ENST00000489808 HDAC4P56524 1084 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 RPL7AP62424 266 aaKnown RBP19.69■□□□□ 0.74
EPHB4-207ENST00000489808 ZBED6P86452 979 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 SPDYCQ5MJ68 293 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 HGSNATQ68CP4 663 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 SLC36A4Q6YBV0 504 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 LPCAT2Q7L5N7 544 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 OR52K2Q8NGK3 314 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 FAM172AQ8WUF8 416 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 PRCCQ92733 491 aaPredicted RBP19.69■□□□□ 0.74
EPHB4-207ENST00000489808 FEM1AQ9BSK4 669 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 SLCO3A1Q9UIG8 710 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 CYP8B1Q9UNU6 501 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 OR51B4Q9Y5P0 310 aa19.69■□□□□ 0.74
EPHB4-207ENST00000489808 BZW2Q9Y6E2 419 aaKnown RBP19.69■□□□□ 0.74
EPHB4-207ENST00000489808 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 BCLAF3A2AJT9 711 aaKnown RBP19.68■□□□□ 0.74
EPHB4-207ENST00000489808 SRGAP2O75044 1071 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 TPM3P06753 285 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 ZNF806P0C7X5 589 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 CREB5Q02930 508 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 SULT2A1Q06520 285 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 MAMLD1Q13495 774 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 ARID5BQ14865 1188 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 ARL13BQ3SXY8 428 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 PLA2G2CQ5R387 149 aa19.68■□□□□ 0.74
EPHB4-207ENST00000489808 DCUN1D2Q6PH85 259 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms