RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SATB1Q01826 763 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 CSTF1Q05048 431 aaKnown RBP11.41□□□□□ -0.58
CPSF7-212ENST00000489728 SULT2A1Q06520 285 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 LMAN2Q12907 356 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 ZNF177Q13360 481 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-212ENST00000489728 CRY1Q16526 586 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 C2orf27AQ580R0 203 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 ARTNQ5T4W7 220 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 C6orf118Q5T5N4 469 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 CXorf57Q6NSI4 855 aaKnown RBP11.41□□□□□ -0.58
CPSF7-212ENST00000489728 PKN3Q6P5Z2 889 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 SFTPA1Q8IWL2 248 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 CARNMT1Q8N4J0 409 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 ALLCQ8N6M5 410 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 CCDC185Q8N715 623 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 TXNDC5Q8NBS9 432 aaKnown RBP11.41□□□□□ -0.58
CPSF7-212ENST00000489728 ZBTB44Q8NCP5 570 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 ZNF564Q8TBZ8 553 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-212ENST00000489728 WFDC5Q8TCV5 224 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 TBC1D31Q96DN5 1066 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 CALR3Q96L12 384 aaKnown RBP11.41□□□□□ -0.58
CPSF7-212ENST00000489728 EPAS1Q99814 870 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 CIPCQ9C0C6 399 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 SEMA4AQ9H3S1 761 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 FBRSQ9HAH7 460 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 POLMQ9NP87 494 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-212ENST00000489728 SPTLC3Q9NUV7 552 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 ZSCAN32Q9NX65 697 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 THAP10Q9P2Z0 257 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-212ENST00000489728 EBF1Q9UH73 591 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 ANAPC7Q9UJX3 599 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 FZD10Q9ULW2 581 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 DOCK4Q8N1I0 1966 aa11.41□□□□□ -0.58
CPSF7-212ENST00000489728 CACNA1HO95180 2353 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 FGF10O15520 208 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-212ENST00000489728 ALDH1A2O94788 518 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 SRPRAP08240 638 aaKnown RBP11.4□□□□□ -0.58
CPSF7-212ENST00000489728 C7P10643 843 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 RHOQP17081 205 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 CD70P32970 193 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 CNR2P34972 360 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 TIE1P35590 1138 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 ARHGAP25P42331 645 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 HADHBP55084 474 aaKnown RBP11.4□□□□□ -0.58
CPSF7-212ENST00000489728 SEMA3BQ13214 749 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 ZNF234Q14588 700 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 SPA17Q15506 151 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 PLEKHG6Q3KR16 790 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 FUT11Q495W5 492 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 PITRM1Q5JRX3 1037 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 ERMARDQ5T6L9 678 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 EGFLAMQ63HQ2 1017 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 TMEM215Q68D42 235 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 MBLAC2Q68D91 279 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 SCYL2Q6P3W7 929 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 C14orf80Q86SX3 495 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 LONP2Q86WA8 852 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 DNAAF5Q86Y56 855 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 CHPFQ8IZ52 775 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 TEKT4Q8WW24 435 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 RFFLQ8WZ73 363 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 ARHGEF26Q96DR7 871 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 TRIM7Q9C029 511 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 TMEM248Q9NWD8 314 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 ZNF212Q9UDV6 495 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 HCN2Q9UL51 889 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 PLA2G4CQ9UP65 541 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 AP4E1Q9UPM8 1137 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 NEU3Q9UQ49 428 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 CACNA1IQ9P0X4 2223 aa11.4□□□□□ -0.58
CPSF7-212ENST00000489728 FANCMQ8IYD8 2048 aa11.4□□□□□ -0.59
CPSF7-212ENST00000489728 A0A0A6YYK5 440 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-212ENST00000489728 ILVBLA1L0T0 632 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 WASH4PA8MWX3 477 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 SGK1O00141 431 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 LILRB5O75023 590 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 SRGAP2O75044 1071 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 ADAM23O75077 832 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 LRIG2O94898 1065 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 PROSCO94903 275 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 NDUFA10O95299 355 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 RHOCP08134 193 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 HOXB2P14652 356 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 MIPP30301 263 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 GGCXP38435 758 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 CSKP41240 450 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 NBL1P41271 181 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 HCAR3P49019 387 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 ST8SIA6P61647 398 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 STARD3Q14849 445 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 RAB6CQ53S08 254 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 BOLA3Q53S33 107 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 ALFQ53S48 1182 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 FSCBQ5H9T9 825 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 EMC10Q5UCC4 262 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 CYP4V2Q6ZWL3 525 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-212ENST00000489728 WDR5BQ86VZ2 330 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 NLRP14Q86W24 1093 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 RASSF3Q86WH2 238 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms