RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 FAM129AQ9BZQ8 928 aa14.57□□□□□ -0.08
VPS26A-205ENST00000489656 PCDH9Q9HC56 1237 aa14.57□□□□□ -0.08
VPS26A-205ENST00000489656 ZNF212Q9UDV6 495 aa14.57□□□□□ -0.08
VPS26A-205ENST00000489656 MIA3Q5JRA6 1907 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 ZSCAN5CA6NGD5 496 aaPredicted RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 H7C0C1 242 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 GFRA2O00451 464 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 PPP1R12AO14974 1030 aaPredicted RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 GLP2RO95838 553 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 KRT14P02533 472 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 GJA1P17302 382 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 MX2P20592 715 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 SLC6A4P31645 630 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 ATP5OP48047 213 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 ZXDBP98169 803 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 RBM10P98175 930 aaKnown RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 STXBP5Q5T5C0 1151 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 TTC39BQ5VTQ0 682 aaPredicted RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 DARS2Q6PI48 645 aaKnown RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 CCNI2Q6ZMN8 369 aaPredicted RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 GSTA5Q7RTV2 222 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 ZC3H18Q86VM9 953 aaKnown RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 LRRC49Q8IUZ0 686 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 CMTM8Q8IZV2 173 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 UMODL1-AS1Q8N2C9 162 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 CASKIN2Q8WXE0 1202 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 RSAD2Q8WXG1 361 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 IGSF8Q969P0 613 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 HDAC11Q96DB2 347 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 PIDD1Q9HB75 910 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 USP29Q9HBJ7 922 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 SMPD4Q9NXE4 827 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 LSM7Q9UK45 103 aaKnown RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 AGO1Q9UL18 857 aaKnown RBP14.56□□□□□ -0.08
VPS26A-205ENST00000489656 CDH23Q9H251 3354 aa14.56□□□□□ -0.08
VPS26A-205ENST00000489656 GOLGA6L7A0A1B0GV03 622 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 SGK1O00141 431 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 IRF1P10914 325 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 POU3F3P20264 500 aaPredicted RBP14.55□□□□□ -0.08
VPS26A-205ENST00000489656 IVDP26440 423 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 RPL21P46778 160 aaKnown RBP14.55□□□□□ -0.08
VPS26A-205ENST00000489656 MAPKAPK2P49137 400 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 NDST2P52849 883 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 NTHL1P78549 312 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 PPIDQ08752 370 aaKnown RBP14.55□□□□□ -0.08
VPS26A-205ENST00000489656 TCEAL5Q5H9L2 206 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 RABGAP1LQ5R372 815 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 CHST9Q7L1S5 443 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 GPR149Q86SP6 731 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 ARHGAP12Q8IWW6 846 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 LGI2Q8N0V4 545 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 CPXM2Q8N436 756 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 KIAA1958Q8N8K9 716 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 TFB1MQ8WVM0 346 aaKnown RBP14.55□□□□□ -0.08
VPS26A-205ENST00000489656 HNRNPLLQ8WVV9 542 aaKnown RBP14.55□□□□□ -0.08
VPS26A-205ENST00000489656 RPRD1AQ96P16 312 aaPredicted RBP14.55□□□□□ -0.08
VPS26A-205ENST00000489656 TSGA13Q96PP4 275 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 PRDM12Q9H4Q4 367 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 ARGLU1Q9NWB6 273 aaPredicted RBP14.55□□□□□ -0.08
VPS26A-205ENST00000489656 MPP6Q9NZW5 540 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 WHRNQ9P202 907 aa14.55□□□□□ -0.08
VPS26A-205ENST00000489656 TRIOBPQ9H2D6 2365 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 REV3LO60673 3130 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.54□□□□□ -0.08
VPS26A-205ENST00000489656 E2F8A0AVK6 867 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 ESYT3A0FGR9 886 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 LEFTY2O00292 366 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 NDC80O14777 642 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 ERLIN1O75477 346 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 CNTN5O94779 1100 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 HOXB8P17481 243 aaPredicted RBP14.54□□□□□ -0.08
VPS26A-205ENST00000489656 CEBPBP17676 345 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 RBL1P28749 1068 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 AVPR1AP37288 418 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 GARSP41250 739 aaKnown RBP14.54□□□□□ -0.08
VPS26A-205ENST00000489656 CARSP49589 748 aaKnown RBP14.54□□□□□ -0.08
VPS26A-205ENST00000489656 IRAK1P51617 712 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 GDF10P55107 478 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 CDH4P55283 916 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 ADAM15Q13444 863 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 P3H1Q32P28 736 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 ALFQ53S48 1182 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 ANKRD54Q6NXT1 300 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 TMC5Q6UXY8 1006 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 C4orf22Q6V702 233 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 C12orf76Q8N812 135 aaPredicted RBP14.54□□□□□ -0.08
VPS26A-205ENST00000489656 GLIS1Q8NBF1 620 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 FATE1Q969F0 183 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 SNF8Q96H20 258 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 GRHL1Q9NZI5 618 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 CFAP97Q9P2B7 532 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 ASIC3Q9UHC3 531 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 MRPS23Q9Y3D9 190 aaKnown RBP14.54□□□□□ -0.08
VPS26A-205ENST00000489656 SH3BP1Q9Y3L3 701 aa14.54□□□□□ -0.08
VPS26A-205ENST00000489656 ANKRD36A6QL64 1941 aa14.53□□□□□ -0.08
VPS26A-205ENST00000489656 C5orf60A6NFR6 353 aa14.53□□□□□ -0.08
VPS26A-205ENST00000489656 KCNN4O15554 427 aa14.53□□□□□ -0.08
VPS26A-205ENST00000489656 MTSS1O43312 755 aa14.53□□□□□ -0.08
VPS26A-205ENST00000489656 CLDN11O75508 207 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms