RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 PRCPP42785 496 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 PSMD8P48556 350 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 SEMG2Q02383 582 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 BNIP3Q12983 259 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 CDH18Q13634 790 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 PITRM1Q5JRX3 1037 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 C6orf118Q5T5N4 469 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 CCDC117Q8IWD4 279 aaPredicted RBP17.58■□□□□ 0.4
TOP3B-217ENST00000489581 STK40Q8N2I9 435 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 OR14C36Q8NHC7 312 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 NXPE2Q96DL1 559 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 FCRL2Q96LA5 508 aaPredicted RBP17.58■□□□□ 0.4
TOP3B-217ENST00000489581 FAM129BQ96TA1 746 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 DDX50Q9BQ39 737 aaKnown RBP17.58■□□□□ 0.4
TOP3B-217ENST00000489581 ZSWIM1Q9BR11 485 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 MIS12Q9H081 205 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 GDF3Q9NR23 364 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 ADAMTS1Q9UHI8 967 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 SLCO3A1Q9UIG8 710 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 PCDHB4Q9Y5E5 795 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 AK5Q9Y6K8 562 aa17.58■□□□□ 0.4
TOP3B-217ENST00000489581 EDDM13A0A1B0GTR0 161 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 TARSL2A2RTX5 802 aaKnown RBP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 RNF225M0QZC1 329 aaPredicted RBP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 TLX3O43711 291 aaPredicted RBP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 MOCS2O96007 188 aaPredicted RBP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 TBXAS1P24557 533 aaPredicted RBP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 BRD2P25440 801 aaKnown RBP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 NUMBP49757 651 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 TARDBPQ13148 414 aaKnown RBP eCLIP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 ARID5BQ14865 1188 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 CNGA2Q16280 664 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 MS4A13Q5J8X5 152 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 SND1Q7KZF4 910 aaKnown RBP eCLIP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 AADATQ8N5Z0 425 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 SERAC1Q96JX3 654 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 RPL10LQ96L21 214 aaKnown RBP17.57■□□□□ 0.4
TOP3B-217ENST00000489581 FZD4Q9ULV1 537 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 CEP83Q9Y592 693 aa17.57■□□□□ 0.4
TOP3B-217ENST00000489581 SLC16A3O15427 465 aaKnown RBP17.56■□□□□ 0.4
TOP3B-217ENST00000489581 MOCS3O95396 460 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 FYNP06241 537 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 SRPRAP08240 638 aaKnown RBP17.56■□□□□ 0.4
TOP3B-217ENST00000489581 PAEPP09466 180 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 C1SP09871 688 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 GOT1P17174 413 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 ACADVLP49748 655 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 CCR5P51681 352 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 PMS1P54277 932 aaKnown RBP17.56■□□□□ 0.4
TOP3B-217ENST00000489581 FKBP3Q00688 224 aaKnown RBP17.56■□□□□ 0.4
TOP3B-217ENST00000489581 ECT2LQ008S8 904 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 PNOCQ13519 176 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 DCAF6Q58WW2 860 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 HES3Q5TGS1 186 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 ANKRD40Q6AI12 368 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 APCDD1Q8J025 514 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 KDM1BQ8NB78 822 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 ADAM32Q8TC27 787 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 DQX1Q8TE96 717 aaKnown RBP17.56■□□□□ 0.4
TOP3B-217ENST00000489581 PTPRN2Q92932 1015 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 SLC35C1Q96A29 364 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 HSFY1Q96LI6 401 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 UBL7Q96S82 380 aaPredicted RBP17.56■□□□□ 0.4
TOP3B-217ENST00000489581 TSG101Q99816 390 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 XPO7Q9UIA9 1087 aaKnown RBP17.56■□□□□ 0.4
TOP3B-217ENST00000489581 NAALADL1Q9UQQ1 740 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 TLR6Q9Y2C9 796 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 ZDHHC9Q9Y397 364 aa17.56■□□□□ 0.4
TOP3B-217ENST00000489581 ITIH6Q6UXX5 1313 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3DA0A087WVF3 549 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3IA0A087WXS9 549 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3EA0A087X179 549 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3KA0A087X1G2 549 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 A0A1W2PQ27 194 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 A0A1W2PQ64 194 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3FA6NER0 549 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 C10orf142B7Z368 130 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3LB9A6J9 549 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TLR4O00206 839 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 YKT6O15498 198 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 FBXO21O94952 628 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 LUC7L3O95232 432 aaKnown RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 IL1BP01584 269 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3HP0C7X1 549 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 CDK4P11802 303 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 EPHA8P29322 1005 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 EIF2S3P41091 472 aaKnown RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 ARRB1P49407 418 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 STK19P49842 368 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 ADPRHP54922 357 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 RNF219Q5W0B1 726 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3GQ6DHY5 549 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3CQ6IPX1 549 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 LRRC69Q6ZNQ3 347 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TBC1D3Q8IZP1 549 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-217ENST00000489581 LGI2Q8N0V4 545 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 TSC1Q92574 1164 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 KAT5Q92993 513 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 FAM149B1Q96BN6 582 aa17.55■□□□□ 0.4
TOP3B-217ENST00000489581 SLC39A13Q96H72 371 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms