RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 OR12D3Q9UGF7 316 aa6.55□□□□□ -1.36
SF3A3-208ENST00000489537 XPO7Q9UIA9 1087 aaKnown RBP6.55□□□□□ -1.36
SF3A3-208ENST00000489537 TBX21Q9UL17 535 aa6.55□□□□□ -1.36
SF3A3-208ENST00000489537 NOVA2Q9UNW9 492 aaKnown RBP6.55□□□□□ -1.36
SF3A3-208ENST00000489537 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
SF3A3-208ENST00000489537 BACE2Q9Y5Z0 518 aa6.55□□□□□ -1.36
SF3A3-208ENST00000489537 PDCD11Q14690 1871 aaKnown RBP6.55□□□□□ -1.36
SF3A3-208ENST00000489537 CUL9Q8IWT3 2517 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 FAM92AA1XBS5 289 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 GMNCA6NCL1 334 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 SDR42E2A6NKP2 422 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 HHLA1C9JL84 531 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TULP2O00295 520 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 KIAA0355O15063 1070 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 CREB3O43889 395 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ATP2C2O75185 946 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 DGKIO75912 1065 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 KRT38O76015 456 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ANXA9O76027 345 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 NEBLO76041 1014 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ACSL3O95573 720 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 CPP00450 1065 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 C1RP00736 705 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 USP17L7P0C7H9 530 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ACRP10323 421 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 CPB1P15086 417 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TCF4P15884 667 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 LAG3P18627 525 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 IL4RP24394 825 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 YWHAQP27348 245 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 HADHAP40939 763 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 MSH2P43246 934 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 BRCC3P46736 316 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 VPS41P49754 854 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 IRAK1P51617 712 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 SLC5A3P53794 718 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 IL9RQ01113 521 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 PPIDQ08752 370 aaKnown RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 NME3Q13232 169 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 SEMA5AQ13591 1074 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 AUHQ13825 339 aaKnown RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 FRG1Q14331 258 aaKnown RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 VEPH1Q14D04 833 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TRIP13Q15645 432 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 SEPT7Q16181 437 aaKnown RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ZSCAN26Q16670 478 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 KYNUQ16719 465 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 SLC39A12Q504Y0 691 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TNFAIP8L3Q5GJ75 292 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 DAB2IPQ5VWQ8 1189 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 KCTD16Q68DU8 428 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 NAPEPLDQ6IQ20 393 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 KIAA1841Q6NSI8 718 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 KLHDC10Q6PID8 442 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 C1orf228Q6PIY5 440 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 KCNT2Q6UVM3 1135 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 DENND5BQ6ZUT9 1274 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 RTL10Q7L3V2 364 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TAX1BP1Q86VP1 789 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 FAM131BQ86XD5 332 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 CPNE8Q86YQ8 564 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TRIM42Q8IWZ5 723 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TMEM151AQ8N4L1 468 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 PQLC3Q8N755 202 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 C3orf58Q8NDZ4 430 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ZMIZ2Q8NF64 920 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 DYDC1Q8WWB3 177 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 CPT1BQ92523 772 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ARHGEF2Q92974 986 aaKnown RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ARL8AQ96BM9 186 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 GRAMD1AQ96CP6 724 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 HDAC11Q96DB2 347 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TBC1D31Q96DN5 1066 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 OLFM3Q96PB7 478 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 TSGA13Q96PP4 275 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 SMC6Q96SB8 1091 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ADAM7Q9H2U9 754 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 CCDC134Q9H6E4 229 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 USP29Q9HBJ7 922 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ARHGEF4Q9NR80 690 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 RAB6BQ9NRW1 208 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 INTS9Q9NV88 658 aaKnown RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ARHGEF38Q9NXL2 777 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 NINJ2Q9NZG7 142 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 IL37Q9NZH6 218 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 BFARQ9NZS9 450 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 CXXC1Q9P0U4 656 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 SAMD15Q9P1V8 674 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 IGSF9Q9P2J2 1179 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 PPARGC1AQ9UBK2 798 aaKnown RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 UXTQ9UBK9 157 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ZNF180Q9UJW8 692 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 AAR2Q9Y312 384 aaKnown RBP6.54□□□□□ -1.36
SF3A3-208ENST00000489537 NME7Q9Y5B8 376 aa6.54□□□□□ -1.36
SF3A3-208ENST00000489537 ATXN2Q99700 1313 aaKnown RBP6.53□□□□□ -1.36
SF3A3-208ENST00000489537 FAM170AA1A519 330 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 ARHGAP42A6NI28 874 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 YJEFN3A6XGL0 299 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 TBKBP1A7MCY6 615 aa6.53□□□□□ -1.36
SF3A3-208ENST00000489537 MEIS3P2A8K0S8 358 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms