RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 C9IYK1 514 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 GOLGA8SH3BPF8 625 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 TMEM189-UBE2V1I3L0A0 370 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 APOC4-APOC2K7ER74 178 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 M0QZQ0 153 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 RNF8O76064 485 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 APOC2P02655 101 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 THP07101 528 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ABHD2P08910 425 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 RAG1P15918 1043 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PDGFRAP16234 1089 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 TYMPP19971 482 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 LMO2P25791 158 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 FLT3P36888 993 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 CD96P40200 585 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 KCNJ1P48048 391 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ACLYP53396 1101 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 KRT17Q04695 432 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ADCY2Q08462 1091 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ADCY1Q08828 1119 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ZNF844Q08AG5 666 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 BNIP3Q12983 259 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 GRIK3Q13003 919 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 CALCOCO2Q13137 446 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ITGA7Q13683 1181 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 BYSLQ13895 437 aaKnown RBP5.77□□□□□ -1.49
ATG4A-208ENST00000489247 DPYSL2Q16555 572 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PTGISQ16647 500 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 UPP1Q16831 310 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 DEFB115Q30KQ5 88 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ATP13A4Q4VNC1 1196 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 TTMPQ5BVD1 217 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 RAB41Q5JT25 222 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 FAM102AQ5T9C2 384 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-208ENST00000489247 DAB2IPQ5VWQ8 1189 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 CDCP2Q5VXM1 449 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 MFSD5Q6N075 450 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 HIBCHQ6NVY1 386 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-208ENST00000489247 CD300LGQ6UXG3 332 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 UNC5AQ6ZN44 842 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PAQR9Q6ZVX9 377 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 BEND5Q7L4P6 421 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 STRADAQ7RTN6 431 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ADAT2Q7Z6V5 191 aaKnown RBP5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PHLDB2Q86SQ0 1253 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 WFDC3Q8IUB2 231 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 FUKQ8N0W3 1084 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 C19orf47Q8N9M1 422 aaKnown RBP5.77□□□□□ -1.49
ATG4A-208ENST00000489247 OR6B3Q8NGW1 331 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 UBA3Q8TBC4 463 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PPP1R13LQ8WUF5 828 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 C1orf54Q8WWF1 131 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 RXFP2Q8WXD0 754 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ATG4AQ8WYN0 398 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 RSPH1Q8WYR4 309 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 TLCD1Q96CP7 247 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PGBD4Q96DM1 585 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 RTP4Q96DX8 246 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PIWIL1Q96J94 861 aaKnown RBP5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ATP6V1G3Q96LB4 118 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 SENP8Q96LD8 212 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 GDAP1L1Q96MZ0 367 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 SLC2A13Q96QE2 648 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PKMYT1Q99640 499 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 ZNF670Q9BS34 389 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 DUSP16Q9BY84 665 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 DPH5Q9H2P9 285 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 SNX25Q9H3E2 840 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 DPEP3Q9H4B8 488 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 SYNCQ9H7C4 482 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PCDH9Q9HC56 1237 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 CSNK1G1Q9HCP0 422 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 RGS18Q9NS28 235 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 TMEM51Q9NW97 253 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 SIRPGQ9P1W8 387 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 RCOR3Q9P2K3 495 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-208ENST00000489247 TPX2Q9ULW0 747 aaKnown RBP5.77□□□□□ -1.49
ATG4A-208ENST00000489247 USP18Q9UMW8 372 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 SHOC2Q9UQ13 582 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 PLAAQ9Y263 795 aa5.77□□□□□ -1.49
ATG4A-208ENST00000489247 DOCK3Q8IZD9 2030 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 EVPLQ92817 2033 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 FAM170AA1A519 330 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 LRRD1A4D1F6 860 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 GOLGA6CA6NDK9 693 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 TULP2O00295 520 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 CYB561D2O14569 222 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DNALI1O14645 258 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 TNFRSF10CO14798 259 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 RIPK2O43353 540 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 MGEA5O60502 916 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DAB1O75553 588 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ZNF189O75820 626 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 FBXO21O94952 628 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 CEACAM5P06731 702 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 GOLGA6DP0CG33 693 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ATF2P15336 505 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DESP17661 470 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 TGM2P21980 687 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms